| Protein: | CIRBP_RAT |
| Organism: | Rattus norvegicus |
| Length: | 172 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CIRBP_RAT.
| Description | E-value | Query Range |
Subject Range |
|
|
127.0 | [0..7] | [171..297] |
|
|
126.0 | [0..7] | [171..297] |
|
|
124.0 | [0..3] | [154..324] |
|
Region A: Residues: [1-172] |
1 11 21 31 41 51
| | | | | |
1 MASDEGKLFV GGLSFDTNEQ ALEQVFSKYG QISEVVVVKD RETQRSRGFG FVTFENIDDA 60
61 KDAMMAMNGK SVDGRQIRVD QAGKSSDNRS RGYRGGSAGG RGFFRGGRSR GRGFSRGGGD 120
121 RGYGGGRFES RSGGYGGSRD YYASRSQGGS YGYRSSGGSY RDSYDSYATH NE
|
| Detection Method: |  |
| Confidence: | 23.522879 |
| Match: | 1x5sA |
| Description: | Solution structure of RRM domain in A18 hnRNP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.3641419747005 | bayes_pls_golite062009 |
| nucleic acid binding | 0.652211965253825 | bayes_pls_golite062009 |
| RNA binding | 0.498012521772139 | bayes_pls_golite062009 |
