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View Structure Prediction Details

Protein: gi|125551734
Organism: Oryza sativa Indica Group
Length: 380 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125551734.

Description E-value Query
Range
Subject
Range
ADT1_MAIZE - ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3
314.0 [0..1] [380..1]

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Predicted Domain #1
Region A:
Residues: [1-69]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADDLGPPTV LQKIHGQSMM FSKISPYSLM KNPALYNANT SYSVPLKSYN GMDGNNGFSS  60
   61 VTSVSPVFA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.98
Match: 1de3A
Description: alpha-Sarcin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [70-380]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SAPKEKGLSG FMIDFMMGGV SAAVSKTAAA PIERIKLLIQ NQDEMIKSGR LSHPYKGIAD  60
   61 CFGRTIKDEG VIALWRGNTA NVIRYFPTQA LNFAFKDHFK RMFNFKKDKD GYWKWFAGNL 120
  121 ASGGAAGACS LFFVYSLDYA RTRLANDAKA AKKGGGRQFN GLVDVYRKTL ASDGIAGLYR 180
  181 GFNISCVGII VYRGLYFGMY DSLKPVVLVG NLQDNFLASF LLGWGITIGA GLASYPIDTV 240
  241 RRRMMMTSGE AVKYNSSLDA FKQIVAKEGA KSLFKGAGAN ILRAVAGAGV LAGYDKLQVV 300
  301 VFGKKYGSGG G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.522879
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle