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View Structure Prediction Details

Protein: gi|125543859
Organism: Oryza sativa Indica Group
Length: 568 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125543859.

Description E-value Query
Range
Subject
Range
gi|113548583, gi... - gi|115453023|ref|NP_001050112.1| Os03g0350100 [Oryza sativa (japonica cultivar-group)], gi|113548583...
558.0 [0..1] [556..1]

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Predicted Domain #1
Region A:
Residues: [1-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVLFETPAG FALFKVLDEG KLDKVEDLWK EFTTSDSARK VVELKAFNKF ENTSDALSAA  60
   61 TLIIDSKPTK GLRKFLQKHC EGETLAVADS KLGNAIKEKL KIDCLHNSAV MELMRGLRNQ 120
  121 LTELISGLGA QDLGPMSLGL SHSLSRYKLK FSPEKVDTMI IQAIGLLDDL DKELNTYAMR 180
  181 VREWYGWHFP ELTKIVADNI QYAKVVKMMG DRTNAESLDF SEILSDDEVE AQLKEAAVIS 240
  241 MGTEVSELDL LNIRELCDQV LALSEYRAQL FDYLRSRMNT IAPNLTALVG ELVGARLIAH 300
  301 GGSLVNLAKQ PGSTIQILGA EKALFRALKT KHATPKYGLI YHASLIGQAA PKHKGKISRS 360
  361 LAAKTALAIR YDALGDGEDN SIGLESRVKL ETRLRVLEGK ELGRSAG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.69897
Match: 2nnwA
Description: No description for 2nnwA was found.

Predicted Domain #2
Region A:
Residues: [408-568]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STKGKPKIEV YEKDRKKGAG ALITPAKTYN PAADLVLGQS TEETPKKPEG ASKKRKHQEA  60
   61 EPAGAEETIQ EDGDQEGQKK KKKKKSKDSE DSPVADADGG KKKKKKSKES EEPPVATAEG 120
  121 EKKEKKKKKK SDSQDAKDVA METEASGKKD KKKKKKKHGD E

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.53
Match: 2j63A
Description: No description for 2j63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle