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View Structure Prediction Details

Protein: gi|125546407
Organism: Oryza sativa Indica Group
Length: 509 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125546407.

Description E-value Query
Range
Subject
Range
gi|62321654 - gi|62321654|dbj|BAD95273.1| poly(ADP-ribose) like glycohydrolase [Arabidopsis thaliana]
569.0 [0..1] [496..1]

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Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEARGDLRSI LPYLPVVLRG GALFWPPAAQ EALKALALGP DVSRVSSGDV LADALTDLRL  60
   61 ALNLDPLPRR AAEGFALFFD DLLSRAQARD WFDHVAPSLA RLLLRLPTLL EGHYRAAGDE 120
  121 ARGLRILSSQ DAGLVLLSQE LAAALLACAL FCLFPTADRA EACLPAINF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [170-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSLFAALCYN SRQSQEQKVR CLVHYFDRVT ASTPTGSVSF ERKVLPRRPE SDGITYPDMD  60
   61 TWMKSGVPLC TFRVFSSGLI EDEEQEALEV DFANRYLGGG ALSRGCVQEE IRFMINPELI 120
  121 VGMLFMVSME DNEAIEIVGA ERFSQYMG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [318-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YGSSFRFTGD YLDSKPFDAM GRRKTRIVAI DALDCPTRLQ FESSGLLREV NKAFCGFLDQ  60
   61 SNHQLCA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [385-509]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLVQDLNTKD NCPSVIPDEC IGVSTGNWGC GAFGGNPEIK SMIQWIAASQ ALRSFINYYT  60
   61 FESESLKRLE EVTQWILRHR WTVGELWDML VEYSSQRLRG DTNEGFLTWL LPKDIPNGDV 120
  121 DYMCE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle