YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|114578017
Organism:	Pan troglodytes
Length:	196 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114578017.

Description	E-value	Query Range	Subject Range
TX261_PONAB - Protein TEX261 OS=Pongo abelii GN=TEX261 PE=2 SV=1 TX261_PONPY - Protein TEX261 - Pongo pygmaeus (Orangutan)	1.0E-63	[1..196]	[1..196]
gi\|109103308 - gi\|109103308\|ref\|XP_001101384.1\| PREDICTED: similar to testis expressed sequence 261 [Macaca mulatta...	1.0E-63	[1..196]	[1..196]
TX261_RAT - Protein TEX261 OS=Rattus norvegicus GN=Tex261 PE=2 SV=1 TX261_MOUSE - Protein TEX261 OS=Mus musculus GN=Tex261 PE=2 SV=1	1.0E-63	[1..196]	[1..196]
gi\|27371040, gi\|... - gi\|27371040\|gb\|AAH41231.1\| Tex261-prov protein [Xenopus laevis], gi\|148229399\|ref\|NP_001080112.1\| te...	3.0E-62	[1..196]	[1..196]
gi\|66773092, gi\|... - gi\|66773092\|ref\|NP_001019597.1\| testis expressed sequence 261 [Danio rerio], gi\|63102366\|gb\|AAH95136...	4.0E-62	[1..196]	[1..196]
gi\|73970281 - gi\|73970281\|ref\|XP_538545.2\| PREDICTED: similar to testis expressed gene 261 [Canis familiaris]	1.0E-61	[24..196]	[32..204]
TX261_BOVIN - Protein TEX261 OS=Bos taurus GN=TEX261 PE=2 SV=1	6.0E-58	[24..196]	[21..193]
gi\|21300870, gi\|... - gi\|31227219\|ref\|XP_317847.1\| AGAP011456-PA [Anopheles gambiae str. PEST], gi\|21300870\|gb\|EAA13015.1\|... AGAP011456-PA - \|protein_coding\|3L:24932464:24933241:1\|gene:AGAP011456	4.0E-54	[1..194]	[1..197]
gi\|38104650, gi\|... - gi\|39948698\|ref\|XP_363122.1\| hypothetical protein MGG_08706 [Magnaporthe grisea 70-15], gb\|EAA51184....	5.0E-53	[1..153]	[1..170]
gi\|85115788 - gi\|85115788\|ref\|XP_964934.1\| hypothetical protein NCU00778 [Neurospora crassa OR74A] gi\|32408955, gi\|... - gi\|38636402\|emb\|CAE81939.1\| related to transmembrane protein Tex-261 [Neurospora crassa], gi\|3240895...	6.0E-53	[1..153]	[1..170]

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Predicted Domain #1

Region A:
Residues: [1-196]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWFMYLLSWL SLFIQVAFIT LAVAAGLYYL AELIEEYTVA TSRIIKYMIW FSTAVLIGLY  60
   61 VFERFPTSMI GVGLFTNLVY FGLLQTFPFI MLTSPNFILS CGLVVVNHYL AFQFFAEEYY 120
  121 PFSEVLAYFT FCLWIIPFAF FVSLSAGENV LPSTMQPGDD VVSNYFTKGK RGKRLGILVV 180
  181 FSFIKEAILP SRQKIY

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	149.522879
Match:	PF04148.4
Description:	No description for PF04148.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits