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View Structure Prediction Details

Protein: gi|116309905, gi...
Organism: Oryza sativa Indica Group
Length: 388 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|116309905, gi....

Description E-value Query
Range
Subject
Range
gi|4850383, gi|2... - gi|4850383|gb|AAD31053.1|AC007357_2 Contains similarity to gi|4417304 F15O11.7 putative beta-1,4-man...
609.0 [0..2] [387..3]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPETGPYGHK KTDGICDGVC GEPASKAVLT MSRLRCALRG FDFRALLALL IGVPILILMI  60
   61 YAHGQKVTYF LRPIWESPPK PFKTIPHYYH ENVTMAKLCK LHGWK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [106-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VRETPRRVFD AVLFSNELDI LEIRWNELSP YVSEFVLLES NSTFTGLKKP LHFKENRHRF  60
   61 GFAESRLTYG MIGGRFVKGE NPFVEESYQR VALDQLIKIA KIEDDDLLIM SDVDEIPSGH 120
  121 TIDLLRWC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [234-388]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDIPEILHLQ LRNYLYSFEF FLDDKSWRAS IHRYRSGKTR YAHFRQTDEL LADSGWHCSF  60
   61 CFRYISDFAF KMQAYSHVDR IRFKYFLNPE RIQDVICRGA DLFDMLPEEY TFQEIIAKLG 120
  121 PIPSTFSAVH LPSYLLQNVD RYRYLLPGYC RRESG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle