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View Structure Prediction Details

Protein: BAHL1_ORYSI
Organism: Oryza sativa Indica Group
Length: 339 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BAHL1_ORYSI.

Description E-value Query
Range
Subject
Range
BAH1L_ARATH - Probable E3 ubiquitin-protein ligase BAH1-like OS=Arabidopsis thaliana GN=RF178 PE=2 SV=1
193.0 [0..1] [338..1]

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Predicted Domain #1
Region A:
Residues: [1-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGAIYEEY LREQQDKYLT KCSHVEYKRL KKVLKKCRVG RSLQEDCPNG DQQEGNNESP  60
   61 DICKCNSCTL CDQMFFTELT KEASEIAGCF SSRVQRLLNL HVPSGFLRYI WRVRQCFIDD 120
  121 QQIMVQEGRM LLNYVTMNAI AIRKILKKYD KIHGSVSGRD FKSKMQTDHI ELLQSPWLIE 180
  181 LGAFHLNCNS S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.09691
Match: 1z63A
Description: Sulfolobus solfataricus SWI2/SNF2 ATPase core in complex with dsDNA
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [192-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIDETVGFLK NEFFKNFSCD LTEARPLMTM AISETMKYEY SLTCPICLDT LFNPYALSCG  60
   61 HLFCKGCACG AASVYIFQGV KSAPPEAKCP VCRSDGVFAH AVHMTELDLL IKTRSKDYWR 120
  121 QRLREERNEM VKQSKEYWDS QAMLSMGI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.154902
Match: 1rmdA
Description: RAG1 DIMERIZATION DOMAIN
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.0938889867773109 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle