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View Structure Prediction Details

Protein: gi|125545729
Organism: Oryza sativa Indica Group
Length: 625 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125545729.

Description E-value Query
Range
Subject
Range
gi|8809764 - gi|8809764|gb|AAF79936.1| exoglucanase precursor [Zea mays]
626.0 [0..1] [619..1]

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Predicted Domain #1
Region A:
Residues: [1-625]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLHKFSVI LLMLCFATLG SAQYVKYKDP KQPVSVRVKD LLGRMTLAEK IGQMTQIERE  60
   61 NATAEQIAKY FIGSVLSGGG SVPAPQASAQ AWASMVNEMQ KGALSTRLGI PMIYGIDAVH 120
  121 GHNNVYKATI FPHNVGLGAT RDPDLVKRIG EATALEVRAT GIPYVFAPCV AVCRDPRWGR 180
  181 CYESYSEDPK VVQSLTTLIS GLQGDVPSND VGRPYVGGSK KVAACAKHYV GDGGTVKGIN 240
  241 ENNTIIDTHG LLTIHMPPYY NSIIRGVSTV MVSYSSWNGV KMHANHHLIT DFLKNKLRFR 300
  301 GFVISDWQGI DRITSPPHKN YSYSIEAGIG AGIDMIMVPY TYTEFIDDLT EQVNNKIIPM 360
  361 SRIDDAVYRI LRVKFTMGLF ESPFADSSLA DELGKQEHRE LAREAVRKSL VLLKNGKSSY 420
  421 SPVLPLPKKA GKILVAGSHA DDLGRQCGGW TITWQGQPGN NITAGTTILS AIKATVDPST 480
  481 TVVYSENPDS SVVTGDKYDY AIVVVGEPPY AEGFGDNLNL TIPEPGPTVI QTVCKSIKCV 540
  541 VVLISGRPLV VEPYIGGIDA FVAAWLPGTE GQGVADVLFG DYGFTGKLSR TWFKSVDQLP 600
  601 MNVGDAHYDP LFPFGYGLTT QAHSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 165.0
Match: 1ex1A
Description: Beta-D-glucan exohydrolase, N-terminal domain; Beta-D-glucan exohydrolase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, acting on glycosyl bonds 3.1190602686215 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 2.98773241907716 bayes_pls_golite062009
catalytic activity 2.22613067995402 bayes_pls_golite062009
hydrolase activity 1.22060946899705 bayes_pls_golite062009
chitinase activity 0.67854733864231 bayes_pls_golite062009
glucosidase activity 0.58717079348538 bayes_pls_golite062009
hexosaminidase activity 0.16438321606077 bayes_pls_golite062009
amylase activity 0.0914002140078796 bayes_pls_golite062009
alpha-amylase activity 0.0521244165288097 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle