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View Structure Prediction Details

Protein: CKS1_ORYSI
Organism: Oryza sativa Indica Group
Length: 90 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CKS1_ORYSI.

Description E-value Query
Range
Subject
Range
gi|109505505 - gi|109505505|ref|XP_001054024.1| PREDICTED: similar to CDC28 protein kinase regulatory subunit 2 [Ra...
151.0 [0..3] [77..103]

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Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQIQYSEKY FDDTYEYRHV VLPPEVAKLL PKNRLLSENE WRAIGVQQSR GWVHYAIHRP  60
   61 EPHIMLFRRP LNFQQQQEAA AAAAAQMLPK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.09691
Match: 1buhB
Description: CksHs1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
cyclin-dependent protein kinase regulator activity 3.97841828100668 bayes_pls_golite062009
binding 2.18113207610794 bayes_pls_golite062009
protein binding 1.97943309243131 bayes_pls_golite062009
protein kinase regulator activity 1.37860707665544 bayes_pls_golite062009
kinase regulator activity 1.32978090173102 bayes_pls_golite062009
protein kinase binding 0.944579171364175 bayes_pls_golite062009
kinase binding 0.867010292327918 bayes_pls_golite062009
ubiquitin binding 0.417755994450789 bayes_pls_golite062009
enzyme binding 0.349317458622834 bayes_pls_golite062009
enzyme regulator activity 0.334428481657021 bayes_pls_golite062009
small conjugating protein binding 0.32298430897304 bayes_pls_golite062009

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