| Protein: | gi|125548584 |
| Organism: | Oryza sativa Indica Group |
| Length: | 345 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125548584.
| Description | E-value | Query Range |
Subject Range |
|
|
311.0 | [0..1] | [345..1] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MGRSPCCEKE GLKKGPWTPE EDQKLLAYIE QHGHGCWRSL PSKAGLQRCG KSCRLRWTNY 60
61 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKM
|
| Detection Method: |  |
| Confidence: | 38.09691 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
|
Region A: Residues: [120-345] |
1 11 21 31 41 51
| | | | | |
1 GIDPVTHKPR SDVAGAGGGG GGAAGGAAGA QHAKAAAHLS HTAQWESARL EAEARLAREA 60
61 KLRALAASAT PGAPHLPAPP ASAAAAAAAH GLDSPTSTLS FSESAVLATV LEAHGAAAAA 120
121 AARAAMQPMQ AYDEACKDQH WGDVDAADVG FPGAGAGFTG LLLEGSLNQI PRPAGRDAEA 180
181 DGEFQETEEE KNYWNSILNL VNSSSAPMST AVVVPASHAY SPAPDF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
