| Protein: | gi|123998545, gi... |
| Organism: | synthetic construct |
| Length: | 800 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123998545, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..800] | [1..800] |
|
|
0.0 | [1..800] | [1..751] |
|
|
2.0E-95 | [1..800] | [1..797] |
|
|
1.0E-91 | [1..747] | [1..742] |
|
|
4.0E-91 | [1..748] | [1..749] |
|
Region A: Residues: [1-215] |
1 11 21 31 41 51
| | | | | |
1 MAANVGDQRS TDWSSQYSMV AGAGRENGME TPMHENPEWE KARQALASIS KSGAAGGSAK 60
61 SSSNGPVASA QYVSQAEASA LQQQQYYQWY QQYNYAYPYS YYYPMSMYQS YGSPSQYGMA 120
121 GSYGSATPQQ PSAPQHQGTL NQPPVPGMDE SMSYQAPPQQ LPSAQPPQPS NPPHGAHTLN 180
181 SGPQPGTAPA TQHSQAGPAT GQAYGPHTYT EPAKP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [216-380] |
1 11 21 31 41 51
| | | | | |
1 KKGQQLWNRM KPAPGTGGLK FNIQKRPFAV TTQSFGSNAE GQHSGFGPQP NPEKVQNHSG 60
61 SSARGNLSGK PDDWPQDMKE YVERCFTACE SEEDKDRTEK LLKEVLQARL QDGSAYTIDW 120
121 SREPLPGLTR EPVAESPKKK RWEAASSLHP PRGAGSATRG GGAPS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [381-574] |
1 11 21 31 41 51
| | | | | |
1 QRGTPGAGGA GRARGNSFTK FGNRNVFMKD NSSSSSTDSR SRSSSRSPTR HFRRSDSHSD 60
61 SDSSYSGNEC HPVGRRNPPP KGRGGRGAHM DRGRGRAQRG KRHDLAPTKR SRKKMAALEC 120
121 EDPERELKKQ KRAARFQHGH SRRLRLEPLV LQMSSLESSG ADPDWQELQI VGTCPDITKH 180
181 YLRLTCAPDP STVR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [575-800] |
1 11 21 31 41 51
| | | | | |
1 PVAVLKKSLC MVKCHWKEKQ DYAFACEQMK SIRQDLTVQG IRTEFTVEVY ETHARIALEK 60
61 GDHEEFNQCQ TQLKSLYAEN LPGNVGEFTA YRILYYIFTK NSGDITTELA YLTRELKADP 120
121 CVAHALALRT AWALGNYHRF FRLYCHAPCM SGYLVDKFAD RERKVALKAM IKTFRPALPV 180
181 SYLQAELAFE GEAACRAFLE PLGLAYTGPD NSSIDCRLSL AQLSAF
|
| Detection Method: | |
| Confidence: | 1.15 |
| Match: | 1rz4A |
| Description: | Crystal Structure of Human eIF3k |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.267627928716605 | bayes_pls_golite062009 |
