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View Structure Prediction Details

Protein: gi|114599512
Organism: Pan troglodytes
Length: 228 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114599512.

Description E-value Query
Range
Subject
Range
LHFPL2 - lipoma HMGIC fusion partner-like 2
7.0E-81 [1..228] [1..228]
gi|109077716 - gi|109077716|ref|XP_001108010.1| PREDICTED: similar to lipoma HMGIC fusion partner-like 2 [Macaca mu...
1.0E-77 [1..228] [1..228]
gi|109465907, gi... - gi|157822913|ref|NP_001099872.1| lipoma HMGIC fusion partner-like 2 [Rattus norvegicus], gi|14905906...
1.0E-72 [1..228] [1..220]
gi|50755284 - gi|50755284|ref|XP_414683.1| PREDICTED: similar to HMGIC fusion partner-like 2 [Gallus gallus]
1.0E-72 [1..228] [1..228]
LHPL2_DANRE - Lipoma HMGIC fusion partner-like 2 protein OS=Danio rerio GN=lhfpl2 PE=2 SV=1
1.0E-71 [1..228] [1..225]
LHPL2_MOUSE - Lipoma HMGIC fusion partner-like 2 protein OS=Mus musculus GN=Lhfpl2 PE=2 SV=1
6.0E-71 [1..228] [1..222]
gi|47228433 - gi|47228433|emb|CAG05253.1| unnamed protein product [Tetraodon nigroviridis]
3.0E-70 [1..228] [1..225]
AGAP009941-PA - |protein_coding|3R:45755902:45766669:1|gene:AGAP009941
gi|157014126, gi... - gi|58392058|ref|XP_319072.2| ENSANGP00000013360 [Anopheles gambiae str. PEST], gi|55236159|gb|EAA140...
2.0E-60 [1..228] [1..226]

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Predicted Domain #1
Region A:
Residues: [1-132]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCHVIVTCRS MLWTLLSIVV AFAELIAFMS ADWLIGKARS RGGVEPAGPG GGSPEPYHPT  60
   61 LGIYARCIRN PGVQHFQRDT LCGPYAESFG EIASGFWQAT AIFLAVGIFI LCMVALVSVF 120
  121 TMCVQSIMKK SI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [133-228]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FNVCGLLQGI AGLFLILGLI LYPAGWGCQK AIDYCGHYAS AYKPGDCSLG WAFYTAIGGT  60
   61 VLTFICAVFS AQAEIATSSD KVQEEIEEGK NLICLL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle