YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|3746429
Organism:	Plasmodium falciparum
Length:	371 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3746429.

Description	E-value	Query Range	Subject Range
FABH_CALS8 - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 434...	296.0	[0..48]	[371..2]
FABH_CLOAB - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clostridium acetobutylicum GN=fabH PE=3 SV=1 FABH_CLOAB - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792...	291.0	[0..48]	[371..1]
gi\|166856536, gi... - gi\|76797521\|ref\|ZP_00779827.1\| Beta-ketoacyl-acyl carrier protein synthase III (FabH) [Thermoanaerob...	289.0	[0..51]	[371..7]
gi\|88947119, gi\|... - gi\|88947119\|ref\|ZP_01150132.1\| Beta-ketoacyl-acyl carrier protein synthase III (FabH) [Desulfotomacu...	286.0	[0..50]	[371..7]
gi\|39983582, gi\|... - gi\|39996701\|ref\|NP_952652.1\| 3-oxoacyl-(acyl-carrier-protein) synthase III [Geobacter sulfurreducens...	286.0	[0..50]	[371..2]
FABH_CLOPS - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clostridium perfringens (strain SM101 / Type A) GN=fa...	285.0	[0..48]	[370..1]
FABH_THETN - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Thermoanaerobacter tengcongensis GN=fabH PE=3 SV=1 FABH_CALS4 - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Caldanaerobacter subterraneus subsp. tengcongensis (s...	285.0	[0..51]	[371..7]
gi\|78194064, gi\|... - gi\|78222809\|ref\|YP_384556.1\| 3-oxoacyl-[acyl-carrier-protein] synthase III [Geobacter metallireducen...	285.0	[0..48]	[371..1]
FABH_CLOP1 - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 ...	283.0	[0..48]	[370..1]
FABH_NITEC - 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Nitrosomonas eutropha (strain C91) GN=fabH PE=3 SV=1	283.0	[0..50]	[371..4]

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Predicted Domain #1

Region A:
Residues: [1-371]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLYFITYLC IFHNNIYSVE LIKNNKYNFI NNVHNIKYRT KIRAIYGKTG GKIIGHGHSY  60
   61 PSTEIYNDEL KKYVDTNDEW IRTRTGIKKR RILKRDENIS MLQIDSATQA LETSCLKPSD 120
  121 IDMVINASST PQNLFGDANN ISNKIGCKNS VNMDLTAACT GFIFAFVTAY NFLNRYKNIL 180
  181 IVGSDALSNF VDWRDRNTCV LFGDAAGAVV LQRTEEKEEN KIFNYYLGSD SELNDLLTIN 240
  241 FDHDKYNLDK PNVNKYGKLY MNGKEVFKYT ISNIPKILKK AIQHSNINIE DINYFIFHQA 300
  301 NIRIIETVAK NLNIPMSKVL VNLDEYANTS AASIPLCFSE NIKNGKIKTN DIICMCGFGA 360
  361 GMSYGCVILK Y

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	73.0
Match:	2ebdA
Description:	No description for 2ebdA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits