YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SPX3_ORYSI
Organism: Oryza sativa Indica Group
Length: 277 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPX3_ORYSI.

Description E-value Query
Range
Subject
Range
gi|114188365, gi... - gi|115443378|ref|XP_001218496.1| vacuolar transporter chaperone 4 [Aspergillus terreus NIH2624], gi|...
214.0 [0..1] [254..1]

Back

Predicted Domain #1
Region A:
Residues: [1-200]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGKRLKKQ VEESLPEWRD KFLAYKRLKK LVRLVSSSSG DVGGGGGGEA EFVRLLDGEV  60
   61 DRINAFFLEQ EEEFVIRQRE LQETVEKVAG GGGGGRRPAA AEMRRVRKEI VDLHGEMVLL 120
  121 LNYSAVNYTG LAKILKKYDK RTGRLLRLPF IEKVLRQPFF TTELISRLVR DCEATMEAIF 180
  181 TSSVATTAMA GDRRTWKGCS 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 35.086186
Match: PF03105.10
Description: No description for PF03105.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [201-277]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDAGMAPMAD QQGIFRNTVA ALATMKELRS GSSTYGRFSL PPMAAPASPE SDVLQSIRSD  60
   61 PHLKENGRIP SLQFFYA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle