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View Structure Prediction Details

Protein: gi|114666229
Organism: Pan troglodytes
Length: 290 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114666229.

Description E-value Query
Range
Subject
Range
AT1B2_OCHCU - Sodium/potassium-transporting ATPase subunit beta-2 OS=Ochotona curzoniae GN=ATP1B2 PE=2 SV=1
CCDS32550.1_1 - null
0.0 [1..290] [1..290]
gi|22094878 - gi|22094878|gb|AAM92016.1| Na/K-ATPase beta 2 subunit [synthetic construct]
0.0 [1..290] [1..290]
AT1B2_RABIT - Sodium/potassium-transporting ATPase subunit beta-2 OS=Oryctolagus cuniculus GN=ATP1B2 PE=2 SV=1
0.0 [1..290] [1..290]
gi|73955592 - gi|73955592|ref|XP_546597.2| PREDICTED: similar to Na+/K+ -ATPase beta 2 subunit [Canis familiaris]
0.0 [1..290] [1..290]
AT1B2_MOUSE - Sodium/potassium-transporting ATPase subunit beta-2 OS=Mus musculus GN=Atp1b2 PE=1 SV=2
0.0 [1..290] [1..290]
gi|56540872, gi|... - gi|56799390|ref|NP_036639.2| Na+/K+ -ATPase beta 2 subunit [Rattus norvegicus], gi|56540872|gb|AAH87...
0.0 [1..290] [1..290]

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Predicted Domain #1
Region A:
Residues: [1-66]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIQKEKKSC GQVVEEWKEF VWNPRTHQFM GRTGTSWAFI LLFYLVFYGF LTAMFTLTMW  60
   61 VMLQTV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [67-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDHTPKYQDR LATPGLMIRP KTENLDVIVN VSDTESWDQH VQKLNKFLEP YN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [119-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSIQAQKNDV CRPGRYYEQP DNGVLNYPKR ACQFNRTQLG NCSGIGDSTH YGYSTGQPCV  60
   61 FIKMNRVINF YAGANQSMNV TCAGKRDEDA ENLGNFVMFP ANGNIDLMYF PYYGKKFHVN 120
  121 YTQPLVAVKF LNVTPNVEVN VECRINAANI ATDDERDKFA GRVAFKLRIN KT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle