YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|116050488, gi...
Organism:	Pseudomonas aeruginosa UCBPP-PA14
Length:	237 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|116050488, gi....

Description	E-value	Query Range	Subject Range
gi\|49081992 - gi\|49081992\|gb\|AAT50396.1\| PA2544 [synthetic construct]	1.0E-40	[1..237]	[1..237]
gi\|84326871 - gi\|84326871\|ref\|ZP_00974895.1\| COG0454: Histone acetyltransferase HPA2 and related acetyltransferase...	8.0E-33	[25..237]	[1..213]
gi\|46163661 - gi\|46163661\|ref\|ZP_00204817.1\| COG0454: Histone acetyltransferase HPA2 and related acetyltransferase... gi\|107101991 - gi\|107101991\|ref\|ZP_01365909.1\| hypothetical protein PaerPA_01003038 [Pseudomonas aeruginosa PACS2]	8.0E-33	[25..237]	[1..213]
gi\|84320712 - gi\|84320712\|ref\|ZP_00969083.1\| COG0454: Histone acetyltransferase HPA2 and related acetyltransferase...	1.0E-32	[25..237]	[1..213]
gi\|68345585, gi\|... - gi\|70731286\|ref\|YP_261027.1\| acetyltransferase [Pseudomonas fluorescens Pf-5], gi\|68345585\|gb\|AAY931...	1.0E-31	[25..233]	[1..209]
gi\|66045713, gi\|... - gi\|66045713\|ref\|YP_235554.1\| hypothetical protein Psyr_2477 [Pseudomonas syringae pv. syringae B728a... tr\|F3GBV3\|F3GBV3... - Uncharacterized protein OS=Pseudomonas syringae pv. pisi str. 1704B GN=PSYPI_20103 PE=4 SV=1	2.0E-31	[25..233]	[1..213]
gi\|71735589, gi\|... - gi\|71735589\|ref\|YP_274826.1\| acetyltransferase [Pseudomonas syringae pv. phaseolicola 1448A], gi\|715...	2.0E-31	[25..233]	[1..213]
gi\|28853180, gi\|... - gi\|28869935\|ref\|NP_792554.1\| hypothetical protein PSPTO_2748 [Pseudomonas syringae pv. tomato str. D... tr\|Q881Y3\|Q881Y3... - Uncharacterized protein OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=PSPTO_2748 PE=4 SV=1	3.0E-31	[26..233]	[1..213]
gi\|77459870, gi\|... - gi\|77459870\|ref\|YP_349377.1\| acetyltransferase [Pseudomonas fluorescens Pf0-1], gi\|77383873\|gb\|ABA75...	4.0E-31	[25..233]	[1..209]
gi\|104781212, gi... - gi\|95110199\|emb\|CAK14906.1\| putative acetyltransferase, GNAT family [Pseudomonas entomophila L48], g... gi\|95110199 - gi\|95110199\|emb\|CAK14906.1\| putative acetyltransferase, GNAT family [Pseudomonas entomophila L48]	8.0E-31	[25..232]	[1..208]

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Predicted Domain #1

Region A:
Residues: [1-237]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARPSARPIA VAKRACRCAG GRQGMRSMPD QVTDVRLLDD GYSREVRSLF YHAYRHEPTF  60
   61 AYLMDAQRAG YDQRVRACVR EMVERHLGEE LPAIGLFIDD RLVAAALITP PQRRLDITES 120
  121 WSWRLRMLFS VGLAATRRYL DYHRAVQACL PVGPHHQLPM LGVHPEYQGR QIGEQLLAAV 180
  181 QRWCAEDSAS QGLVLDTGNA RYLDFYQRHG YREIGEVTLG AVREHVLLHP GETPAAT

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	22.69897
Match:	2qecA
Description:	No description for 2qecA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits