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View Structure Prediction Details

Protein: GRS11_ORYSA
Organism: Oryza sativa
Length: 491 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GRS11_ORYSA.

Description E-value Query
Range
Subject
Range
GRS17_ARATH - Monothiol glutaredoxin-S17 OS=Arabidopsis thaliana GN=GRXS17 PE=1 SV=1
374.0 [0..2] [491..3]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVREVGSK AELEAAAGGA RAAAVHFWAA WCEASKQMDE VFAHLAVDFS HAVFLRVEAE  60
   61 EQPEISEAYG VTAVPYFVFL KEGKTVDTLE GANPASLANK VAKLAGPA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.522879
Match: 2cvkA
Description: Crystal Structure of Thermus thermophilus Thioredoxin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [109-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVAESAVPAS LGVAAGPAVL EKVQEMAQQN GASATSSAED ALNKRLEQLV NSHPVFLFMK  60
   61 GTPEQPRCGF SRKVVDVLKQ EGVEFGSFDI LTDNDVREGM KKFSNWPTFP QLYCKGELLG 120
  121 GCDIVIAMHE SGELKDVFKE HNIPLQPQGS KNEEAVKAKP 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 25.468521
Match: PF00462.15
Description: No description for PF00462.15 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [269-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DTEKSGAVSE PALLTAAQKE RLESLVNFST VMAFIKGTPE EPKCGFSGKL VHILKQEKIP  60
   61 FSSFDILTDD EVRQGLKLLS NWPSYPQLYI NGELVGGSDI VMEMHKSGEL KKVLSE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.69
Match: 2ht9A
Description: No description for 2ht9A was found.

Predicted Domain #4
Region A:
Residues: [385-491]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGIVAKESLE DRLKALISSA PVMLFMKGTP DAPRCGFSSK VVNALKQAGV SFGAFDILSD  60
   61 EEVRQGLKTY SNWPTFPQLY YKSELIGGCD IVLELEKSGE LKSTLSE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.154902
Match: 1ykaA
Description: Solution structure of Grx4, a monothiol glutaredoxin from E. coli.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle