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View Structure Prediction Details

Protein: gi|114636956
Organism: Pan troglodytes
Length: 242 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114636956.

Description E-value Query
Range		 Subject
Range
gi|14250071 - gi|14250071|gb|AAH08440.1| APAF1 interacting protein [Homo sapiens]
 5.0E-66 [1..242] [1..242]
MTNB_MOUSE - Methylthioribulose-1-phosphate dehydratase OS=Mus musculus GN=Apip PE=1 SV=1
 7.0E-65 [1..242] [1..241]
gi|109470291, gi... - gi|27702700|ref|XP_215785.1| PREDICTED: similar to APAF1 interacting protein [Rattus norvegicus], gi...
 9.0E-64 [1..242] [1..241]
MTNB_BOVIN - Methylthioribulose-1-phosphate dehydratase OS=Bos taurus GN=APIP PE=2 SV=1
 3.0E-63 [1..242] [1..242]
MTNB_XENTR - Methylthioribulose-1-phosphate dehydratase OS=Xenopus tropicalis GN=apip PE=2 SV=1
 4.0E-63 [9..242] [6..239]
MTNB_XENLA - Methylthioribulose-1-phosphate dehydratase OS=Xenopus laevis GN=apip PE=2 SV=1
 1.0E-62 [9..242] [6..239]
gi|114636954 - gi|114636954|ref|XP_001149568.1| PREDICTED: APAF1 interacting protein isoform 1 [Pan troglodytes]
 1.0E-59 [1..211] [1..211]

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Predicted Domain #1
Region A:
Residues: [1-242] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGCDAREGD CCSRRCGAQD KEHPRYLIPE LCKQFYHLGW VTGTGGGISL KHGDEIYIAP  60
   61 SGVQKERIQP EDMFVCDINE KDISGPSPSK KLKKSQCTPL FMNAYTMRGA GAVIHTHSKA 120
  121 AVMATLLFPG REFKITHQEM IKGIKKCTSG GYYRYDDMLV VPIIENTPEE KDLKDRMAHA 180
  181 MNEYPDSCAV LVRRHGVYVW GETWEKAKTM CECYDYLFDI AVSMKKVGLD PSQLPVGENG 240
  241 IV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.69897
Match: 1jdiA
Description: L-ribulose-5-phosphate 4-epimerase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.89539096965643 bayes_pls_golite062009
catalytic activity 1.58067730905989 bayes_pls_golite062009
protein binding 0.401574215469404 bayes_pls_golite062009
lyase activity 0.114082266751758 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle