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View Structure Prediction Details

Protein: ASIP_RAT
Organism: Rattus norvegicus
Length: 131 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASIP_RAT.

Description E-value Query
Range		 Subject
Range
ASIP_MOUSE, AGSW... - Agouti-signaling protein OS=Mus musculus GN=Asip PE=2 SV=1, (Q03288) Agouti switch protein precursor...
 168.0 [0..1] [131..1]
ASIP_HORSE - Agouti-signaling protein OS=Equus caballus GN=ASIP PE=3 SV=1
 157.0 [0..1] [131..1]
ASIP_COLPO - Agouti-signaling protein OS=Colobus polykomos GN=ASIP PE=3 SV=1
 151.0 [0..1] [131..1]
ASIP_PAPAN - Agouti-signaling protein OS=Papio anubis GN=ASIP PE=3 SV=1
ASIP_MACSY - Agouti-signaling protein OS=Macaca sylvanus GN=ASIP PE=3 SV=1
ASIP_CHLAE - Agouti-signaling protein OS=Chlorocebus aethiops GN=ASIP PE=3 SV=1
ASIP_ERYPA - Agouti-signaling protein OS=Erythrocebus patas GN=ASIP PE=3 SV=1
 150.0 [0..1] [131..1]
ASIP_TRAAU - Agouti-signaling protein OS=Trachypithecus auratus GN=ASIP PE=3 SV=1
ASIP_TRAOB - Agouti-signaling protein OS=Trachypithecus obscurus GN=ASIP PE=3 SV=1
ASIP_TRACR - Agouti-signaling protein OS=Trachypithecus cristatus GN=ASIP PE=3 SV=1
ASIP_TRAFR - Agouti-signaling protein OS=Trachypithecus francoisi GN=ASIP PE=3 SV=1
 149.0 [0..1] [131..1]
gi|157734610 - gi|157734610|dbj|BAF80792.1| agouti signaling protein [Macaca fuscata]
ASIP_MACFU - Agouti-signaling protein OS=Macaca fuscata fuscata GN=ASIP PE=3 SV=1
ASIP_MACMU - Agouti-signaling protein OS=Macaca mulatta GN=ASIP PE=3 SV=1
ASIP_MACFA - Agouti-signaling protein OS=Macaca fascicularis GN=ASIP PE=3 SV=1
 149.0 [0..1] [131..1]
ASIP_CERMI - Agouti-signaling protein OS=Cercopithecus mitis GN=ASIP PE=3 SV=1
 148.0 [0..1] [131..1]
ASIP_PANTR - Agouti-signaling protein OS=Pan troglodytes GN=ASIP PE=3 SV=1
ASIP_PANPA - Agouti-signaling protein OS=Pan paniscus GN=ASIP PE=3 SV=1
gi|90991191 - gi|90991191|dbj|BAE93019.1| agouti signaling protein [Gorilla gorilla]
ASIP_GORGO - Agouti-signaling protein OS=Gorilla gorilla gorilla GN=ASIP PE=3 SV=1
 148.0 [0..1] [131..1]
gi|114681785 - gi|114681785|ref|XP_001156726.1| PREDICTED: similar to agouti signaling protein [Pan troglodytes]
 148.0 [0..1] [130..1]
ASIP_MACSI - Agouti-signaling protein OS=Macaca sinica GN=ASIP PE=3 SV=1
ASIP_MACRA - Agouti-signaling protein OS=Macaca radiata GN=ASIP PE=3 SV=1
ASIP_MACAR - Agouti-signaling protein OS=Macaca arctoides GN=ASIP PE=3 SV=1
 147.0 [0..1] [131..1]

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Predicted Domain #1
Region A:
Residues: [1-131] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVTRLLLAT LVGFLCFLTV HSHLVFEETL GDDRSLKSNS SINSLDFSSV SIVALNKKSK  60
   61 KISRKEAEKR KRSSKKKASI KKVARPPPPS PCVATRDSCK PPAPACCNPC ASCQCRFFGS 120
  121 ACTCRVLNPN C

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 55.124939
Match: PF05039.3
Description: No description for PF05039.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle