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View Structure Prediction Details

Protein: gi|114625347, gi...
Organism: Pan troglodytes
Length: 725 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114625347, gi....

Description E-value Query
Range
Subject
Range
gi|76625004 - gi|76625004|ref|XP_873484.1| PREDICTED: similar to corneal wound healing-related protein [Bos taurus...
1122.0 [0..1] [725..81]
gi|39725955 - gi|39725955|ref|NP_078911.2| corneal wound healing-related protein [Homo sapiens]
1109.0 [0..1] [725..1]
NAA35_MACFA - N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Macaca fascicularis GN=NAA35 PE=2 SV=1
gi|109111989 - gi|109111989|ref|XP_001107941.1| PREDICTED: similar to corneal wound healing-related protein [Macaca...
1109.0 [0..1] [725..1]
gi|73946413, gi|... - gi|73946417|ref|XP_856295.1| PREDICTED: similar to corneal wound healing-related protein isoform 4 [...
1108.0 [0..1] [725..1]
NAA35_MOUSE - N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Mus musculus GN=Naa35 PE=1 SV=1
1103.0 [0..1] [725..1]
NAA35_CHICK - N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Gallus gallus GN=NAA35 PE=2 SV=1
1092.0 [0..1] [725..1]
NAA35_RAT - N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Rattus norvegicus GN=Naa35 PE=1 SV=1
1090.0 [0..1] [725..1]
NAA35_DANRE - N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Danio rerio GN=naa35 PE=2 SV=1
1019.0 [0..1] [725..1]

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Predicted Domain #1
Region A:
Residues: [1-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMKASVDDD DSGWELSMPE KMEKSNTNWV DITQDFEEAC RELKLGELLH DKLFGLFEAM  60
   61 SAIEMMDPKM DAGMIGNQVN RKVLNFEQAI KDGTIKIKDL TLPELIGIMD TCFCCLITWL 120
  121 EGHSLAQTVF TCLYIHNPDF IEDPAMKAFA LGILKICDIA REKVNKAAVF EEEDFQSMTY 180
  181 GFKMANSVTD LRVTGMLKDV EDDMQRRVKS TRSRQGEERD PEV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 54.455932
Match: PF04112.3
Description: No description for PF04112.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [224-406]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELEHQQCLAV FSRVKFTRVL LTVLIAFTKK ETSAVAEAQK LMVQAADLLS AIHNSLHHGI  60
   61 QAQNDTTKGD HPIMMGFEPL VNQRLLPPTF PRYAKIIKRE EMVNYFARLI DRIKTVCEVV 120
  121 NLTNLHCILD FFCEFSEQSP CVLSRSLLQT TFLVDNKKVF GTHLMQDMVK DALRSFVSPP 180
  181 VLS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [407-518]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKCYLYNNHQ AKDCIDSFVT HCVRPFCSLI QIHGHNRARQ RDKLGHILEE FATLQDEAEK  60
   61 VDAALHTMLL KQEPQRQHLA CLGTWVLYHN LRIMIQYLLS GFELELYSMH EY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [519-725]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YYIYWYLSEF LYAWLMSTLS RADGSQMAEE RIMEEQQKGR SSKKTKKKKK VRPLSREITM  60
   61 SQAYQNMCAG MFKTMVAFDM DGKVRKPKFE LDSEQVRYEH RFAPFNSVMT PPPVHYLQFK 120
  121 EMSDLNKYSP PPQSPELYVA ASKHFQQAKM ILENIPNPDH EVNRILKVAK PNFVVMKLLA 180
  181 GGHKKESKVP PEFDFSAHKY FPVVKLV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle