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View Structure Prediction Details

Protein: gi|125528046
Organism: Oryza sativa Indica Group
Length: 112 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125528046.

Description E-value Query
Range
Subject
Range
gi|125586396, gi... - gi|34896264|ref|NP_909476.1| hypothetical protein [Oryza sativa], gi|215766913|dbj|BAG99141.1| unnam...
gi|125544031 - gi|125544031|gb|EAY90170.1| hypothetical protein OsI_11735 [Oryza sativa Indica Group]
132.0 [0..3] [109..5]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKLYGLFWV MALVLATVAG TKSDEGCSRD LQDLIMECQK YVMNPANPKI EPSNACCSVI  60
   61 QKANVPCLCS KVTKEIEKIV CMEKVVYVAD YCKKPLQPGS KCGSYTIPSL QQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.28
Match: 1afhA
Description: LIPID TRANSFER PROTEIN FROM MAIZE SEEDLINGS, NMR, 15 STRUCTURES
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle