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View Structure Prediction Details

Protein: gi|125556173
Organism: Oryza sativa Indica Group
Length: 389 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125556173.

Description E-value Query
Range
Subject
Range
gi|215704694, gi... - gi|50905845|ref|XP_464411.1| putative Cgi67 serine protease [Oryza sativa (japonica cultivar-group)]...
269.0 [0..1] [389..1]

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Predicted Domain #1
Region A:
Residues: [1-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAVASTVAA RFAFFPPAPP SYGVEPPPSP SPAAAAEDGA VVELSGVPRR AGVEARRLPT  60
   61 GRGTEVVAMY VRQPGARLTL LYSHGNAADL GQMYELFVEL SSHLNVNLMG YDYSGYGQSS 120
  121 GKPSEQNTYS DIEAAYRCLV ETYGATEENI ILYGQSVGSG PTLDLASRLP HLRAVVLHSP 180
  181 ILSGLRVMYP VKHTYWFDIY KNIDKVPLVK CPVLVIHGTA DEVVDCSHGR ALWELSKIKY 240
  241 EPLWVKGGNH CNLELYPEYI KHLKKFVMAI EKLPPTKDES SGSSGPSDPC EIGSESMQSS 300
  301 RKSTDVKDKS RSSIDHRHSV DRREKPRGSI DRRDKSRKSI DHPDKPRASV DQPDRPRRSI 360
  361 DRFGGMMRSV TSVKLCNIDC FKVTYASGS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.39794
Match: 2hdwA
Description: No description for 2hdwA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle