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View Structure Prediction Details

Protein: gi|125554574
Organism: Oryza sativa Indica Group
Length: 317 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125554574.

Description E-value Query
Range
Subject
Range
gi|125541199 - gi|125541199|gb|EAY87594.1| hypothetical protein OsI_09005 [Oryza sativa Indica Group]
gi|50912957, gi|... - gi|50912957|ref|XP_467886.1| F-box protein-like [Oryza sativa (japonica cultivar-group)], gi|4680568...
165.0 [0..1] [317..1]

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Predicted Domain #1
Region A:
Residues: [1-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGECSEHRCW DELLPDALGL IFRKLSLKDV LTVVPRVCKS WGRVVAGPYC WQEIDIQEWS  60
   61 QQQSKPDQLK RMVRMLVARS GGSFHRISVS GLPGDPLFTF IGDHARSLKT MELPRSDISD 120
  121 SLVENVAPRL SNVTFLDISS CTKIGARALE AFGKHCKSLI GLRRVMHPTD VVGRASQHDE 180
  181 ARAIACNMPK LRHLEIGYML IATKAVVEIA SQCHDLKFLD LRGCWNVDDK LLQESYPGLK 240
  241 VVGPYVDDCY ENSFWEECSD DSDDSIYWEL MDDDYYAAGS DDEGIWDDGQ GLEGLEVRFY 300
  301 GGGFSESHAG FDWPPSP

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Detection Method: PSI-BLAST
Confidence: 22.522879
Match: 2p1mB
Description: No description for 2p1mB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle