| Protein: | gi|125541688 |
| Organism: | Oryza sativa Indica Group |
| Length: | 394 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125541688.
| Description | E-value | Query Range |
Subject Range |
|
|
195.0 | [0..1] | [393..356] |
|
Region A: Residues: [1-200] |
1 11 21 31 41 51
| | | | | |
1 MDGRESTVAS GSNFSSFYVQ HRGIGVPGGS GHPAGLHGPP PGGYRQHLDA VSAGYPFQPP 60
61 HIGGSHIGQG YHHVDASAPV AQHGSGGGGG GMDIGMGVEM SADAKGDQGS GAGQDEPVKK 120
121 KRGRPRKYKP DGAVTLGLSP SSSTPHSSTS AMGTMVTTPG SGFGSGAGSG GSGSGALTEK 180
181 RGRGRPPGSG KMQQLASLGK
|
| Detection Method: |  |
| Confidence: | 7.045757 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [201-394] |
1 11 21 31 41 51
| | | | | |
1 WFLGSVGTGF TPHVIIISPG EDVAARIMSF SQQGPRAVCI ISATGAVSTA TLHQDSNSGG 60
61 VVTYEGRFEI LCLSGSYLVI EEGGSRTRSG GLCIALCGPD HRVIGGSVGG VLTAAGTVQV 120
121 IVGSFMYGGT KKNKAKAEQE TENNEEPIGG EEETPTMALP DHNMPHHTMG GWSAGLMRQM 180
181 DSRTPNIDIN SIRE
|
| Detection Method: | |
| Confidence: | 20.522879 |
| Match: | 2nmuA |
| Description: | No description for 2nmuA was found. |
| Term | Confidence | Notes |
| catalytic activity | 0.210430303475354 | bayes_pls_golite062009 |
