YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|125541199
Organism: Oryza sativa Indica Group
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125541199.

Description E-value Query
Range
Subject
Range
gi|109486425 - gi|109486425|ref|XP_237458.4| PREDICTED: similar to F-box/LRR-repeat protein 17 (F-box and leucine-r...
155.0 [0..7] [317..414]

Back

Predicted Domain #1
Region A:
Residues: [1-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGECGGGEYR CWEELLPDAL GLVFRNLPLR EVLTVVPRVC KSWSRVVAGP YCWQEIDIEE  60
   61 WRQQQGKPEQ LVRMVEMLVA RSCGSCRRIS VSGLPGDPLF SFIGDHARAL RTLEIPRSEI 120
  121 SDAAVESVAP RLPNVTFLDI SSCTKIGARA LEAFGKNCKS LVGLRRVMHP TDVAGKACQR 180
  181 DEARAIACTM PRLRHLEMGY MVIATDAVLD ILARCRDLRF LDLRGCWAVD DKFLQERHPG 240
  241 LRVLGPGVDD CFENSYLEEC SDYSDDSSIY SWELMEDDDD DYYAVGSDDE AIWDDGQGLE 300
  301 NLEVRFYGGG FSESYAGFDW PPSP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.39794
Match: 2p1mB
Description: No description for 2p1mB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle