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View Structure Prediction Details

Protein: gi|125562545
Organism: Oryza sativa Indica Group
Length: 341 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125562545.

Description E-value Query
Range
Subject
Range
gi|15451054, gi|... - gi|20148315|gb|AAM10048.1| unknown protein [Arabidopsis thaliana], gi|18414386|ref|NP_568128.1| elec...
191.0 [0..49] [341..49]
gi|116060627 - gi|116060627|emb|CAL57105.1| unnamed protein product [Ostreococcus tauri]
176.0 [0..21] [340..21]
gi|83719580, gi|... - gi|83719580|ref|YP_442911.1| glutathione S-transferase, putative [Burkholderia thailandensis E264], ...
169.0 [0..24] [312..16]
gi|67547261, gi|... - gi|67547261|ref|ZP_00425166.1| Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-te...
158.0 [0..22] [263..8]
gi|67668302, gi|... - gi|67668302|ref|ZP_00465479.1| Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-te...
153.0 [0..63] [336..297]
gi|89362083, gi|... - gi|89362083|ref|ZP_01199894.1| conserved hypothetical protein [Xanthobacter autotrophicus Py2], gi|8...
143.0 [0..110] [340..7]
gi|68128823, gi|... - gi|68128823|emb|CAJ05899.1| thiol-dependent reductase 1 [Leishmania major], gi|38343962|emb|CAE46536...
gi|157874663 - gi|157874663|ref|XP_001685750.1| thiol-dependent reductase 1 [Leishmania major]
141.0 [0..11] [256..72]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATALHLPP LLLARRLRFS SAAASTSTSR RTTRLSAQLD DTAAASTSTS TSDKPAAASS  60
   61 FAPPPDFKPP EPKTFEVKPG QSDDIVTASL AIPFRLGTGV FALGYSVSLV SPDEVAPDEY 120
  121 ALDFQGR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.639 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.639 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.586 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.558 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.486 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.481 a.4.5 "Winged helix" DNA-binding domain
View Download 0.471 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.402 a.7.7 BAG domain
View Download 0.387 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.375 a.1.1 Globin-like

Predicted Domain #2
Region A:
Residues: [128-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KVKESSKIGQ CPRPEKPIEI YEFEGCPFCR KVREMVAVLD LDVLFYPCPK NGPTFRPKVL  60
   61 EMGGKQQFPY MVDPNTGVAM YESDAIIKYL ADKYGDGTVP IMLSLGILTT ITAGLAMSGR 120
  121 SGKGSKYTPA KLPPEPIELW AYEGSPFCKI VRETLVELEL PHLLHSCARG SPRRQEFLKK 180
  181 YGIFQAPYIE DPNTGVKMFE SADIIDYLRA TYAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.0
Match: 1eemA
Description: Class omega GST
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle