| Protein: | gi|125559548 |
| Organism: | Oryza sativa Indica Group |
| Length: | 781 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125559548.
| Description | E-value | Query Range |
Subject Range |
|
|
723.0 | [0..10] | [781..40] |
|
|
710.0 | [0..1] | [781..1] |
|
|
699.0 | [0..1] | [781..1] |
|
|
688.0 | [0..14] | [781..16] |
|
|
681.0 | [0..11] | [781..6] |
|
|
674.0 | [0..1] | [781..1] |
|
|
673.0 | [0..1] | [774..1] |
|
|
672.0 | [0..1] | [781..1] |
|
|
648.0 | [0..14] | [781..21] |
|
Region A: Residues: [1-508] |
1 11 21 31 41 51
| | | | | |
1 MDAETGPAAP QDQWKSYCRT ISLLAFQSFG VVYGDLSTSP LYVYKSAFSG RLNNYRDETT 60
61 IFGLFSLIFW TLTLLPLLKY VIIVLNADDN GEGGTFALYS LLCRHAKFSL LPNQQSADEE 120
121 LSTYYQPGVG GIISSPLKRF LEKHRKLRTC LLLFVLFGAC MVIGDGVFTP AISVLSAISG 180
181 LKDPGPGGIP DGWVVFIACI VLVGLFALQH RGTHRVAFMF APIVVVWLLS IGVIGLYNII 240
241 HWNHRIFLAL SPHYVIKFFK MTGKDGWLSL GGVLLAITGT EAMFADLGHF TAASIRLAFV 300
301 GAIYPCLVLQ YMGQAAFLSR NMSAVEDSFY QSVPRSLFWP VFVIATLAAV VGSQSIISAT 360
361 FSIVKQCLSL GCFPRVKVVH TSRWIHGQIY IPEINWILMV LCLAVTLGFR DTTVIGNAYG 420
421 LACIVVMFVT TWLMALVIIF VWQKNILLAL LFVVAFGSIE VVYLSAAVTK VPQGGWAPIV 480
481 FAFVFMLVMY VWHYGSRRKY LFDLQNKV
|
| Detection Method: |  |
| Confidence: | 1.0 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [509-659] |
1 11 21 31 41 51
| | | | | |
1 SMKWILTLGP SLGIVRVPGI GLIYTELVTG VPSIFSHFVT NLPAFHQVLV FVCVKSVPVP 60
61 FVPEDERYLI GRIGPREYRM YRCIVRYGYK DVQKDDENFE NHLVMSIAKF IQMEAEEAAS 120
121 SGSYESSEGR MAVIHTEDTT GTGLVMRDSN N
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [660-781] |
1 11 21 31 41 51
| | | | | |
1 EASGTSLTRS SRSETLRSLQ SIYEQESGSL SRRRRVRFEI AEEERIDPQV RDELADLLDA 60
61 KEAGVTYIIG HSYVKARKNS NFLKTFAIDY AYSFLRKNCR GPAVALHIPH ISLVEVGMIY 120
121 YV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
