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View Structure Prediction Details

Protein: gi|116310726
Organism: Oryza sativa Indica Group
Length: 174 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|116310726.

Description E-value Query
Range
Subject
Range
gi|17979317, gi|... - gi|4432837|gb|AAD20686.1| hypothetical protein [Arabidopsis thaliana], pir||D84684 hypothetical prot...
162.0 [0..3] [174..2]

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Predicted Domain #1
Region A:
Residues: [1-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGSARSAAA KHAYRMFAPS RGAAARCPGS PGADEFDESD VWGSYGAAGV ESSPAELGAR  60
   61 GRAIPSARAG RKAPLDRAAG SLPVNIPDWQ KILGVEYRDH QAAAAEWELQ GDGDDDYEYG 120
  121 KVAGVGGVVI PPHELAWRGR AASLSVHEGI GRTLKGRDLS RVRDAVWKKT GFED

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 36.886057
Match: PF04520.4
Description: No description for PF04520.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle