YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|90085585
Organism:	Macaca fascicularis
Length:	298 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|90085585.

Description	E-value	Query Range	Subject Range
gi\|74006830 - gi\|74006830\|ref\|XP_537947.2\| PREDICTED: similar to ADP/ATP translocase 3 (Adenine nucleotide translo...	1.0E-88	[1..298]	[173..470]
gi\|68366574 - gi\|68366574\|ref\|XP_694733.1\| PREDICTED: similar to ADP,ATP carrier protein 2 (ADP/ATP translocase 2)...	4.0E-86	[1..298]	[15..312]
ADT3_BOVIN - ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=1 SV=3	4.0E-85	[1..298]	[1..298]
gi\|114597246 - gi\|114597246\|ref\|XP_517556.2\| PREDICTED: solute carrier family 25 (mitochondrial carrier; adenine nu...	6.0E-85	[9..298]	[211..500]
gi\|45360469, gi\|... - gi\|89271383\|emb\|CAJ82932.1\| slc25a5 [Xenopus tropicalis], gi\|89268733\|emb\|CAJ82402.1\| slc25a5 [Xenop...	7.0E-85	[1..298]	[1..298]
gi\|62089230 - gi\|62089230\|dbj\|BAD93059.1\| ADP,ATP carrier protein, liver isoform T2 variant [Homo sapiens]	8.0E-85	[1..298]	[26..323]
gi\|53127328, gi\|... - gi\|57530120\|ref\|NP_001006443.1\| solute carrier family 25 (mitochondrial carrier; adenine nucleotide ...	2.0E-84	[1..298]	[1..298]

Back

Predicted Domain #1

Region A:
Residues: [1-298]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEQAISFAK DFLAGGIAAA ISKTAVAPIE RVKLLLQVQH ASKQIAADKQ YKGIVDCIVR  60
   61 IPKEQGVLSF WRGNLANVIR YFPTQALNFA FKDKYKQIFL GGVDKHTQFW RYFAGNLASG 120
  121 GAAGATSLCF VYPLDFARTR LAADVGKSGT EREFRGLGDC LVKITKSDGI RGLYQGFSVS 180
  181 VQGIIIYRAA YFGVYDTAKG MLPDPKNTHI VVSWMIAQTV TAVAGVVSYP FDTVRRRMMM 240
  241 QSGRKGADIM YTGTVDCWRK IFRDEGGKAF FKGAWSNVLR GMGGAFVLVL YDELKKVI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	85.30103
Match:	1okcA
Description:	structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits