| Protein: | gi|123999418, gi... |
| Organism: | synthetic construct |
| Length: | 772 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123999418, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
357.0 | [0..26] | [772..133] |
|
|
300.0 | [0..37] | [772..18] |
|
|
294.0 | [0..26] | [772..133] |
|
|
292.0 | [0..1] | [772..1] |
|
|
285.0 | [0..1] | [772..1] |
|
|
274.0 | [0..108] | [772..1] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MAAESALQVV EKLQARLAAN PDPKKLLKYL KKLSTLPITV DILAETGVGK TVNSLRKHEH 60
61 VGSFARDLVA QWKKLVPVER NAEPDEQDFE KSNSRKRPRD ALQKEEEMEG DYQETWKATG 120
121
|
| Detection Method: |  |
| Confidence: | 8.221849 |
| Match: | 1wjtA |
| Description: | Solution structure of the N-terminal Domain I of mouse transcription elongation factor S-II protein 3 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [121-271] |
1 11 21 31 41 51
| | | | | |
1 SRSYSPDHRQ KKHRKLSELE RPHKVSHGHE RRDERKRCHR MSPTYSSDPE SSDYGHVQSP 60
61 PSCTSPHQMY VDHYRSLEED QEPIVSHQKP GKGHSNAFQD RLGASQERHL GEPHGKGVVS 120
121 QNKEHKSSHK DKRPVDAKSD EKASVVSREK S
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [272-467] |
1 11 21 31 41 51
| | | | | |
1 HKALSKEENR RPPSGDNARE KPPSSGVKKE KDREGSSLKK KCLPPSEAAS DNHLKKPKHR 60
61 DPEKAKLDKS KQGLDSFDTG KGAGDLLPKV KEKGSNNLKT PEGKVKTNLD RKSLGSLPKV 120
121 EETDMEDEFE QPTMSFESYL SYDQPRKKKK KIVKTSATAL GDKGLKKNDS KSTGKNLDSV 180
181 QKLPKVNKTK SEKPAG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [468-561] |
1 11 21 31 41 51
| | | | | |
1 ADLAKLRKVP DVLPVLPDLP LPAIQANYRP LPSLELISSF QPKRKAFSSP QEEEEAGFTG 60
61 RRMNSKMQVY SGSKCAYLPK MMTLHQQCIR VLKN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [562-669] |
1 11 21 31 41 51
| | | | | |
1 NIDSIFEVGG VPYSVLEPVL ERCTPDQLYR IEEYNHVLIE ETDQLWKVHC HRDFKEERPE 60
61 EYESWREMYL RLQDAREQRL RVLTKNIQFA HANKPKGRQA KMAFVNSV
|
| Detection Method: | |
| Confidence: | 86.585027 |
| Match: | PF06881.2 |
| Description: | No description for PF06881.2 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [670-772] |
1 11 21 31 41 51
| | | | | |
1 AKPPRDVRRR QEKFGTGGAA VPEKIKIKPA PYPMGSSHAS ASSISFNPSP EEPAYDGPST 60
61 SSAHLAPVVS STVSYDPRKP TVKKIAPMMA KTIKAFKNRF SRR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
