| Protein: | gi|123993665, gi... |
| Organism: | synthetic construct |
| Length: | 636 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123993665, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..636] | [1..636] |
|
|
0.0 | [1..636] | [1..636] |
|
|
0.0 | [1..636] | [1..636] |
|
|
0.0 | [1..636] | [1..636] |
|
Region A: Residues: [1-183] |
1 11 21 31 41 51
| | | | | |
1 MNPSAPSYPM ASLYVGDLHP DVTEAMLYEK FSPAGPILSI RVCRDMITRR SLGYAYVNFQ 60
61 QPADAERALD TMNFDVIKGK PVRIMWSQRD PSLRKSGVGN IFIKNLDKSI DNKALYDTFS 120
121 AFGNILSCKV VCDENGSKGY GFVHFETQEA AERAIEKMNG MLLNDRKVFV GRFKSRKERE 180
181 AEL
|
| Detection Method: |  |
| Confidence: | 59.69897 |
| Match: | 1cvjA |
| Description: | Poly(A)-binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 4.92126426323641 | bayes_pls_golite062009 |
|
Region A: Residues: [184-283] |
1 11 21 31 41 51
| | | | | |
1 GARAKEFTNV YIKNFGEDMD DERLKDLFGK FGPALSVKVM TDESGKSKGF GFVSFERHED 60
61 AQKAVDEMNG KELNGKQIYV GRAQKKVERQ TELKRKFEQM
|
| Detection Method: | |
| Confidence: | 5.3 |
| Match: | 2do0A |
| Description: | No description for 2do0A was found. |
|
Region A: Residues: [284-380] |
1 11 21 31 41 51
| | | | | |
1 KQDRITRYQG VNLYVKNLDD GIDDERLRKE FSPFGTITSA KVMMEGGRSK GFGFVCFSSP 60
61 EEATKAVTEM NGRIVATKPL YVALAQRKEE RQAHLTN
|
| Detection Method: | |
| Confidence: | 19.522879 |
| Match: | 2d9pA |
| Description: | No description for 2d9pA was found. |
|
Region A: Residues: [381-566] |
1 11 21 31 41 51
| | | | | |
1 QYMQRMASVR AVPNPVINPY QPAPPSGYFM AAIPQTQNRA AYYPPSQIAQ LRPSPRWTAQ 60
61 GARPHPFQNM PGAIRPAAPR PPFSTMRPAS SQVPRVMSTQ RVANTSTQTM GPRPAAAAAA 120
121 ATPAVRTVPQ YKYAAGVRNP QQHLNAQPQV TMQQPAVHVQ GQEPLTASML ASAPPQEQKQ 180
181 MLGERL
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [567-636] |
1 11 21 31 41 51
| | | | | |
1 FPLIQAMHPT LAGKITGMLL EIDNSELLHM LESPESLRSK VDEAVAVLQA HQAKEAAQKA 60
61 VNSATGVPTV
|
| Detection Method: | |
| Confidence: | 44.522879 |
| Match: | 1g9lA |
| Description: | poly(A) binding protein |
Matching Structure (courtesy of the PDB): |
|
