| Protein: | gi|157928480, gi... |
| Organism: | synthetic construct |
| Length: | 248 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|157928480, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-69 | [1..248] | [1..248] |
|
|
2.0E-60 | [1..248] | [1..234] |
|
|
5.0E-58 | [1..228] | [1..212] |
|
|
2.0E-57 | [1..228] | [1..212] |
|
|
6.0E-46 | [48..224] | [4..179] |
|
|
1.0E-38 | [53..209] | [11..167] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MAPKAAKGAK PEPAPAPPPP GAKPEEDKKD GKEPSDKPQK AVQDHKEPSD KPQKAVQPKH 60
61 EVGTRRGCRR YRWELK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [77-248] |
1 11 21 31 41 51
| | | | | |
1 DSNKEFWLLG HAEIKIRSLG CLIAAMILLS SLTVHPILRL IITMEISFFS FFILLYSFAI 60
61 HRYIPFILWP ISDLFNDLIA CAFLVGAVVF AVRSRRSMNL HYLLAVILIG AAGVFAFIDV 120
121 CLQRNHFRGK KAKKHMLVPP PGKEKGPQQG KGPEPAKPPE PGKPPGPAKG KK
|
| Detection Method: | |
| Confidence: | 0.974 |
| Match: | 2akhZ |
| Description: | Normal mode-based flexible fitted coordinates of a non-translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli |
Matching Structure (courtesy of the PDB): |
|
