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View Structure Prediction Details

Protein: gi|116666788, gi...
Organism: Dusicyon thous
Length: 141 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|116666788, gi....

Description E-value Query
Range		 Subject
Range
HBA_CANLF - Hemoglobin subunit alpha OS=Canis lupus familiaris GN=HBA PE=1 SV=1
 180.0 [0..1] [141..1]
HBA_CYNSP - Hemoglobin subunit alpha OS=Cynopterus sphinx GN=HBA PE=1 SV=1
 180.0 [0..1] [141..1]
HBA_VULVU - Hemoglobin subunit alpha OS=Vulpes vulpes GN=HBA PE=1 SV=1
 180.0 [0..1] [141..1]
HBA1_TADBR - Hemoglobin subunit alpha-1 OS=Tadarida brasiliensis PE=1 SV=1
 180.0 [0..1] [141..1]
HBA_PROLO - Hemoglobin subunit alpha OS=Procyon lotor GN=HBA PE=1 SV=1
 180.0 [0..1] [141..1]
HBA_CANLA - Hemoglobin subunit alpha OS=Canis latrans GN=HBA PE=1 SV=2
 180.0 [0..1] [141..2]
HBA_TUPGL - Hemoglobin subunit alpha OS=Tupaia glis GN=HBA PE=1 SV=1
 180.0 [0..1] [141..1]
HBA_ONDZI - Hemoglobin subunit alpha OS=Ondatra zibethicus GN=HBA PE=1 SV=1
 179.0 [0..1] [141..1]
HBA_ROUAE - Hemoglobin subunit alpha OS=Rousettus aegyptiacus GN=HBA PE=1 SV=1
 179.0 [0..1] [141..1]
HBA_LEPWE - Hemoglobin subunit alpha-1/2 OS=Leptonychotes weddellii PE=1 SV=1
 179.0 [0..1] [141..1]

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Predicted Domain #1
Region A:
Residues: [1-141] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLSPADKTNI KSTWDKIGGH AGDYGGEALD RTFQSFPTTK TYFPHFDLSP GSAQVKAHGK  60
   61 KVADALTTAV AHLDDLPGAL SALSDLHAYK LRVDPVNFKL LSHCLLVTLA CHHPTEFTPA 120
  121 VHASLDKFFT AVSTVLTSKY R

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.0
Match: 1fhjA
Description: Hemoglobin, alpha-chain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxygen transporter activity 12.7518923261978 bayes_pls_golite062009
hemoglobin binding 7.80994828423656 bayes_pls_golite062009
oxygen binding 7.60582561525971 bayes_pls_golite062009
hemoglobin alpha binding 6.6133698394882 bayes_pls_golite062009
organic acid binding 4.76461807092667 bayes_pls_golite062009
hemoglobin beta binding 3.70103281638942 bayes_pls_golite062009
transporter activity 2.30531874940611 bayes_pls_golite062009
substrate-specific transporter activity 2.13533596372692 bayes_pls_golite062009
binding 1.61998555357457 bayes_pls_golite062009
protein binding 1.50013290504406 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 0.436801914510671 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle