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View Structure Prediction Details

Protein: gi|208965648, gi...
Organism: synthetic construct
Length: 693 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|208965648, gi....

Description E-value Query
Range
Subject
Range
gi|113430446 - gi|113430446|ref|XP_001128695.1| PREDICTED: similar to TSPY-like 2 [Homo sapiens]
4.0E-98 [50..693] [52..695]
gi|12858539 - gi|12858539|dbj|BAB31351.1| unnamed protein product [Mus musculus]
1.0E-97 [1..407] [1..400]
gi|67971218 - gi|67971218|dbj|BAE01951.1| unnamed protein product [Macaca fascicularis]
1.0E-95 [1..693] [1..695]
gi|114577374 - gi|114577374|ref|XP_001152621.1| PREDICTED: hypothetical protein [Pan troglodytes]
3.0E-89 [26..403] [4..385]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRPDEGPPA KTRRLSSSES PQRDPPPPPP PPPLLRLPLP PPQQRPRLQE ETEAAQVLAD  60
   61 MRGVGLGPAL PPPPPYVILE EGGIRAYFTL GAECPGWDST IESGYGEAPP PTESLEALPT 120
  121 PEASGGSLEI DFQVVQSSSF GGEGALETCS AVGWAPQRLV DP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [163-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSKEEAIIIV EDEDEDERES MRSSRRRRRR RRRKQRKVKR ESRERNAERM ESILQALEDI  60
   61 QLDLEAVNIK AGKAFLRLKR KFIQMRRPFL ERRDLIIQHI PGFWVKAFLN HPRISILINR 120
  121 RDEDIFRYLT NLQVQDLRHI SMGYKMKLYF QTNPYFTNMV IVKEFQRNRS GRLVSHSTPI 180
  181 RWHRGQEPQA RRHGNQDASH SFFSWFSNHS LPEADRIAEI IKNDLWVNPL RYYL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.0
Match: 2e50A
Description: No description for 2e50A was found.

Predicted Domain #3
Region A:
Residues: [397-488]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RERGSRIKRK KQEMKKRKTR GRCEVVIMED APDYYAVEDI FSEISDIDET IHDIKISDFM  60
   61 ETTDYFETTD NEITDINENI CDSENPDHNE VP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [489-693]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNETTDNNES ADDHETTDNN ESADDNNENP EDNNKNTDDN EENPNNNENT YGNNFFKGGF  60
   61 WGSHGNNQDS SDSDNEADEA SDDEDNDGNE GDNEGSDDDG NEGDNEGSDD DDRDIEYYEK 120
  121 VIEDFDKDQA DYEDVIEIIS DESVEEEGIE EGIQQDEDIY EEGNYEEEGS EDVWEEGEDS 180
  181 DDSDLEDVLQ VPNGWANPGK RGKTG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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