| Protein: | gi|123986789, gi... |
| Organism: | synthetic construct |
| Length: | 683 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123986789, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..683] | [1..684] |
|
|
0.0 | [1..683] | [1..683] |
|
|
0.0 | [1..683] | [1..683] |
|
|
0.0 | [1..683] | [1..683] |
|
|
0.0 | [1..683] | [1..683] |
|
|
0.0 | [1..683] | [1..685] |
|
|
0.0 | [1..683] | [1..683] |
|
|
0.0 | [1..683] | [1..683] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MALSKRELDE LKPWIEKTVK RVLGFSEPTV VTAALNCVGK GMDKKKAADH LKPFLDDSTL 60
61 RFVDKLFEAV EEGRSSRHSK SSSDRSR
|
| Detection Method: |  |
| Confidence: | 32.30103 |
| Match: | 1x4qA |
| Description: | Solution structure of PWI domain in U4/U6 small nuclear ribonucleoprotein Prp3(hPrp3) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [88-188] |
1 11 21 31 41 51
| | | | | |
1 KRELKEVFGD DSEISKESSG VKKRRIPRFE EVEEEPEVIP GPPSESPGML TKLQIKQMME 60
61 AATRQIEERK KQLSFISPPT PQPKTPSSSQ PERLPIGNTI Q
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [189-371] |
1 11 21 31 41 51
| | | | | |
1 PSQAATFMND AIEKARKAAE LQARIQAQLA LKPGLIGNAN MVGLANLHAM GIAPPKVELK 60
61 DQTKPTPLIL DEQGRTVDAT GKEIELTHRM PTLKANIRAV KREQFKQQLK EKPSEDMESN 120
121 TFFDPRVSIA PSQRQRRTFK FHDKGKFEKI AQRLRTKAQL EKLQAEISQA ARKTGIHTST 180
181 RLA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [372-427] |
1 11 21 31 41 51
| | | | | |
1 LIAPKKELKE GDIPEIEWWD SYIIPNGFDL TEENPKREDY FGITNLVEHP AQLNPP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [428-496] |
1 11 21 31 41 51
| | | | | |
1 VDNDTPVTLG VYLTKKEQKK LRRQTRREAQ KELQEKVRLG LMPPPEPKVR ISNLMRVLGT 60
61 EAVQDPTKV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [497-683] |
1 11 21 31 41 51
| | | | | |
1 EAHVRAQMAK RQKAHEEANA ARKLTAEQRK VKKIKKLKED ISQGVHISVY RVRNLSNPAK 60
61 KFKIEANAGQ LYLTGVVVLH KDVNVVVVEG GPKAQKKFKR LMLHRIKWDE QTSNTKGDDD 120
121 EESDEEAVKK TNKCVLVWEG TAKDRSFGEM KFKQCPTENM AREHFKKHGA EHYWDLALSE 180
181 SVLESTD
|
| Detection Method: | |
| Confidence: | 1.1 |
| Match: | 2iygA |
| Description: | No description for 2iygA was found. |
