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View Structure Prediction Details

Protein: gi|125524058
Organism: Oryza sativa Indica Group
Length: 257 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125524058.

Description E-value Query
Range
Subject
Range
gi|56312925, gi|... - gi|56476882|ref|YP_158471.1| hypothetical protein ebA2569 [Aromatoleum aromaticum EbN1], gi|56312925...
167.0 [0..37] [237..97]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSLSSSTA SAAACCKSRS RNPPPAPAPH TSTARVVRSS RRRLLLVFFS AEAAAAATSG  60
   61 LIQTPCGQAY PFAGTNVKKP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPPSTPYSQS QSQQQFGLDA KGRIRACPST NPGCVSTNPT VGASCSLASP LIVPANTPTD  60
   61 KAAASLREAI LKTQRNAVIK ADEETAYGHY IQAEVDGGAG RDVMEFLLKE SQSQSQEVVA 120
  121 AYRCVATKVI FVYPFTTAVG DSRGQSQRIA AVAQELGWYA PDLLNAATAD DHSILDY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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