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View Structure Prediction Details

Protein: gi|125524847
Organism: Oryza sativa Indica Group
Length: 461 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125524847.

Description E-value Query
Range
Subject
Range
CIPK1_ORYSA - CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice)
CIPKV_ORYSJ - CBL-interacting protein kinase 31 OS=Oryza sativa subsp. japonica GN=CIPK31 PE=1 SV=1
381.0 [0..1] [444..9]

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Predicted Domain #1
Region A:
Residues: [1-315]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKASILMN RYELGRMLGQ GTFAKVYHAR NLASNQSVAI KVIDKEKVLR VGMIDQIKRE  60
   61 ISIMRLVRHP NIVQLHEVMA SKSKIYFAME YVRGGELFSR VARGRLKEDA ARKYFQQLIG 120
  121 AVDFCHSRGV YHRDLKPENL LVDENGNLKV SDFGLSAFKE CQKQDGLLHT TCGTPAYVAP 180
  181 EIINKRGYDG AKADIWSCGV ILFVLLAGYL PFHDSNLMEM YRKISKGDVK FPQWFTTDVR 240
  241 RLLSRLLDPN PNIRITVEKL VEHPWFKKGY KPAVMLSQPN ESNNLKDVHT AFSADHKDNE 300
  301 GKAKEPASSL KPVSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.69897
Match: 1zmuA
Description: Catalytic and ubiqutin-associated domains of MARK2/PAR-1: Wild type
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [316-461]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NAFDIISLSK GFDLSGLFEN DKEQKADSRF MTQKPASAIV SKLEQIAETE SFKVKKQDGL  60
   61 VKLQGSKEGR KGQLAIDAEI FEVTPSFFVV EVKKSAGDTL EYEKFCNKGL RPSLRDICWD 120
  121 GQSEHPSLAQ SSTLTQSSKS ISRHAI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.30103
Match: 2ehbD
Description: No description for 2ehbD was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle