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View Structure Prediction Details

Protein: gi|125525487
Organism: Oryza sativa Indica Group
Length: 1285 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|125525487.

Predicted Domain #1
Region A:
Residues: [1-635]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPESWRDAEA NASSSASVAA ADSSPGNGKG GGGGGGAAVA RGERAASASA SARVPFHKLF  60
   61 AFADKTDAAL MALGTLGAVA NGAALPFMTV LFGNLIDAFG GAMGIHDVVN RVSMVSLEFI 120
  121 YLAIASAVAS FVQVTCWMIT GERQAARIRN LYLKTILRQE IAFFDKYTNT GEVVGRMSGD 180
  181 TVLIQDAMGE KVGKFIQLVV TFLGGFIVAF AQGWLLTLVM MATIPPLVVA GAVMSNVVAK 240
  241 MASLGQAAYA ESSVVVEQTI GSIRTVASFT GEKQAVEKYN KSLKSAYKSG VREGLAAGLG 300
  301 MGTVMVLLFC GYSLGIWYGA KLILLKGYTG AKVMNVIFAV LTGSLALGQA SPSMKAFAGG 360
  361 QAAAYKMFET INRKPEIDAY STTGMKPDDI RGDIEFRDVY FSYPTRPDEQ IFRGFSLSIP 420
  421 SGTTVALVGQ SGSGKSTVIS LIERFYDPQL GDVLIDGVNL KEFQLRWIRS KIGLVSQEPV 480
  481 LFAASIKENI AYGKDNATDQ EIRAAAELAN ASKFIDKMPQ GLDTSVGEHG TQLSGGQKQR 540
  541 IAIARAILKD PRILLLDEAT SALDAESERI VQEALDRVMT NRTTVIVAHR LSTVRNADTI 600
  601 AVIHQGTLVE KGPHHELLKD PEGAYSQLIK LQEAN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 151.0
Match: 3b5wA
Description: No description for 3b5wA was found.

Predicted Domain #2
Region A:
Residues: [636-1285]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RQDKSDRKGD SGARSGKQLS INQSASRSRR SSRDNSHHSF SVPFGMPLGI DIQDGSSDNL  60
   61 CDGMPQDVPL SRLASLNKPE IPVLILGSIA SVISGVIFPI FAILLSNVIK AFYEPPHLLR 120
  121 KDSQFWSSMF LVFGAVYFLS LPVSSYLFSI AGCRLIKRIR LMTFEKVVNM EIEWFDHPEN 180
  181 SSGAIGARLS ADAAKVRGLV GDALQLVVQN TTTLIAGLVI AFVSNWELSL IILALIPLIG 240
  241 LNGWIQMKFI QGFSADAKMM YEEASQVAND AVSSIRTVVS FSAEEKVMDL YKKKCEGPLR 300
  301 TGIRTGIISG IGFGVSFFLL FGVYAASFYA GARLVEENKT TFPKVFRVFL ALAMAAIGVS 360
  361 QSSTLTSDSS KAKSAVSSIF AIVDRKSRID PSEDAGVTVE TLHGNIEFQH VSFRYPTRPD 420
  421 VEIFRDLCLT IHSGKTVALV GESGSGKSTA ISLLQRFYDP DVGHILLDGV DIQKFQLKWL 480
  481 RQQMGLVSQE PALFNDTVRA NIAYGKEGEA TESEIIEAAK LANAHKFISS SHQGYGTTVG 540
  541 ERGAQLSGGQ KQRIAIARAI VKDPKILLLD EATSALDAES ERVVQDALDR VMVNRTTVIV 600
  601 AHRLSTIQNA DLIAVVKNGV IIEKGKHDTL MNIKDGAYAS LVALHSAASS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 154.0
Match: 3b5xA
Description: No description for 3b5xA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle