YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|114553901
Organism:	Pan troglodytes
Length:	81 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114553901.

Description	E-value	Query Range	Subject Range
gi\|109475853 - gi\|109475853\|ref\|XP_001078135.1\| PREDICTED: similar to catenin, beta interacting protein 1 [Rattus n...	137.0	[0..1]	[81..76]
gi\|56118446, gi\|... - gi\|56118446\|ref\|NP_001008103.1\| catenin, beta interacting protein 1 [Xenopus (Silurana) tropicalis],... gi\|50418196, gi\|... - gi\|50418196\|gb\|AAH77191.1\| Ctnnbip1b protein [Xenopus laevis], gi\|148224325\|ref\|NP_001086620.1\| cate...	129.0	[0..1]	[81..1]
gi\|9712053, gi\|1... - gi\|9712053\|dbj\|BAB08007.1\| beta-catenin-interacting protein [Xenopus laevis], gi\|51950189\|gb\|AAH8247...	128.0	[0..1]	[81..1]
CNBP1_BOVIN - Beta-catenin-interacting protein 1 OS=Bos taurus GN=CTNNBIP1 PE=3 SV=1	127.0	[0..1]	[81..1]
gi\|18858879, gi\|... - gi\|9712049\|dbj\|BAB08006.1\| beta-catenin-interacting protein [Danio rerio], gi\|32451958\|gb\|AAH54693.1...	126.0	[0..1]	[81..1]
gi\|47228806 - gi\|47228806\|emb\|CAG07538.1\| unnamed protein product [Tetraodon nigroviridis]	125.0	[0..1]	[81..1]
CNBP1_MOUSE - Beta-catenin-interacting protein 1 OS=Mus musculus GN=Ctnnbip1 PE=1 SV=1 tr\|G3IKH6\|G3IKH6... - Beta-catenin-interacting protein 1 OS=Cricetulus griseus GN=I79_024379 PE=4 SV=1	124.0	[0..1]	[81..1]
LZIC - leucine zipper and CTNNBIP1 domain containing gi\|114553868, gi... - gi\|114553868\|ref\|XP_001161245.1\| PREDICTED: leucine zipper and CTNNBIP1 domain containing isoform 5 ...	120.0	[0..1]	[81..113]

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Predicted Domain #1

Region A:
Residues: [1-81]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNREGAPGKS PEEMYIQQKV RVLLMLRKMG SNLTASEEEF LRTYAGVVNS QLSQLPPHSI  60
   61 DQGAEDVVMA FSRSETEDRR Q

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	30.0
Match:	1m1eB
Description:	beta-catenin-interacting protein ICAT
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
beta-catenin binding	3.08885684536612	bayes_pls_golite062009
binding	2.263388192549	bayes_pls_golite062009
protein binding	0.871734119777931	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: