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View Structure Prediction Details

Protein: gi|114627090
Organism: Pan troglodytes
Length: 238 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114627090.

Description E-value Query
Range
Subject
Range
gi|20072969 - gi|20072969|gb|AAH26544.1| Dolichyl pyrophosphate phosphatase 1 [Mus musculus]
1.0E-48 [1..238] [1..238]
gi|62644867, gi|... - gi|62644867|ref|XP_231129.3| PREDICTED: similar to Dolichyldiphosphatase 1 (Dolichyl pyrophosphate p...
1.0E-48 [1..238] [1..238]
gi|33988429 - gi|33988429|gb|AAH09493.2| DOLPP1 protein [Homo sapiens]
1.0E-48 [2..238] [1..237]
gi|73967810 - gi|73967810|ref|XP_850246.1| PREDICTED: similar to Dolichyldiphosphatase 1 (Dolichyl pyrophosphate p...
2.0E-48 [1..238] [1..238]
gi|76630766 - gi|76630766|ref|XP_581102.2| PREDICTED: dolichyl pyrophosphate phosphatase 1 isoform 1 [Bos taurus]
6.0E-48 [1..238] [1..238]
gi|54035387, gi|... - gi|55742543|ref|NP_001007062.1| dolichyl pyrophosphate phosphatase 1 [Danio rerio], gi|54035387|gb|A...
gi|55742543 - ref|NP_001007062.1| zgc:101585 [Danio rerio]
9.0E-44 [1..238] [1..237]
gi|89269908, gi|... - gi|89269908|emb|CAJ82482.1| dolichyl pyrophosphate phosphatase 1 [Xenopus tropicalis], gi|62860144|r...
5.0E-43 [1..238] [1..238]
gi|91083233 - gi|91083233|ref|XP_973728.1| PREDICTED: similar to AGAP002666-PA [Tribolium castaneum]
1.0E-35 [6..233] [16..241]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAADGQCSLP ASWRPVTLTH VEYPAGDLSG HLLAYLSLSP VFVIVGFVTL IIFKRELHTI  60
   61 SFLGGLALNE GVNWLIKNVI QEPRPCGGPH TAVGTKYGMP SSHSQFMWFF SVYSFLFLYL 120
  121 RMHQTNNARF LDLLWRHVLS LGLLAVAFLV SYSRVYLLYH TWSQVLYGGI AGGLMAIAWF 180
  181 I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.221849
Match: 1d2tA
Description: Bacterial acid phosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.767627914425245 bayes_pls_golite062009
phosphatase activity 0.722810330266611 bayes_pls_golite062009
phosphoric ester hydrolase activity 0.534563060036778 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [182-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FTQEVLTPLF PRIAAWPVSE FFLIRDTSLI PNVLWFEYTV TRAEARNRQR KLGTKLQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.622 0.178 integral to endoplasmic reticulum membrane g.3.11 EGF/Laminin
View Download 0.703 0.132 integral to endoplasmic reticulum membrane g.7.1 Snake toxin-like
View Download 0.772 0.033 integral to endoplasmic reticulum membrane g.41.3 Zinc beta-ribbon
View Download 0.633 0.031 integral to endoplasmic reticulum membrane b.84.2 Rudiment single hybrid motif
View Download 0.700 0.015 integral to endoplasmic reticulum membrane d.58.18 Regulatory domain in the aminoacid metabolism


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle