| Protein: | gi|114652258, gi... |
| Organism: | Pan troglodytes |
| Length: | 237 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114652258, gi....
| Description | E-value | Query Range |
Subject Range |
|
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9.0E-42 | [1..237] | [1..237] |
|
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2.0E-41 | [1..237] | [1..237] |
|
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1.0E-40 | [1..237] | [1..237] |
|
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5.0E-40 | [1..237] | [1..239] |
|
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8.0E-39 | [1..230] | [1..230] |
|
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1.0E-38 | [1..237] | [1..238] |
|
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8.0E-32 | [3..226] | [11..266] |
|
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4.0E-31 | [3..234] | [11..273] |
|
Region A: Residues: [1-150] |
1 11 21 31 41 51
| | | | | |
1 MALPPSPLAM EYVNDFDLMK FEVKREPSEG RPGPPTASLG STPYSSVPPS PTFSEPGMVG 60
61 ATEGTRPGLE ELYWLATLQQ QLGAGEALGL SPEEAMELLQ GQGPVPVDGP HGYYPGSPEE 120
121 TGAQHVQLAE RFSDAALVSM SVRELNRQLR
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.230 | 0.448 | protein dimerization activity | a.26.1 | 4-helical cytokines |
| View | Download | 0.274 | 0.017 | positive regulation of transcription from RNA polymerase II promoter | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.226 | N/A | N/A | a.29.4 | RecG, N-terminal domain |
|
Region A: Residues: [151-237] |
1 11 21 31 41 51
| | | | | |
1 GCGRDEALRL KQRRRTLKNR GYAQACRSKR LQQRRGLEAE RARLAAQLDA LRAEVARLAR 60
61 ERDLYKARCD RLTSSGPGSG DPSHLFL
|
| Detection Method: | |
| Confidence: | 12.69897 |
| Match: | 1gtwA |
| Description: | CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE TOM-1A PROMOTER |
Matching Structure (courtesy of the PDB): |
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