YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|114651752
Organism:	Pan troglodytes
Length:	335 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114651752.

Description	E-value	Query Range	Subject Range
OSGEP_XENLA - Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Xenopus laevis GN=osgep PE=2 SV=1	0.0	[1..335]	[1..335]
gi\|111305744, gi... - gi\|62859377\|ref\|NP_001016112.1\| O-sialoglycoprotein endopeptidase [Xenopus (Silurana) tropicalis], g...	1.0E-99	[1..335]	[1..335]
OSGEP_RAT - Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Rattus norvegicus GN=Osgep PE=2 SV=2	6.0E-98	[1..335]	[1..335]
gi\|109082626 - gi\|109082626\|ref\|XP_001088971.1\| PREDICTED: O-sialoglycoprotein endopeptidase [Macaca mulatta]	7.0E-98	[1..335]	[1..335]
OSGEP_BOVIN - Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Bos taurus GN=OSGEP PE=2 SV=1	8.0E-98	[1..335]	[1..335]
gi\|84662768, gi\|... - gi\|84662768\|ref\|NP_598437.2\| O-sialoglycoprotein endopeptidase [Mus musculus], gi\|26340686\|dbj\|BAC34...	6.0E-97	[1..335]	[1..335]
gi\|115620282, gi... - gi\|115936048\|ref\|XP_001187049.1\| PREDICTED: similar to Osgep-prov protein [Strongylocentrotus purpur...	3.0E-96	[1..335]	[1..335]
gi\|62955475, gi\|... - gi\|62955475\|ref\|NP_001017751.1\| hypothetical protein LOC550447 [Danio rerio], gi\|62531084\|gb\|AAH9336...	8.0E-95	[1..335]	[1..335]

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Predicted Domain #1

Region A:
Residues: [1-335]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAVLGFEGS ANKIGVGVVR DGKVLANPRR TYVTPPGTGF LPGDTARHHR AVILDLLQEA  60
   61 LTESGLTSQD IDCIAYTKGP GMGAPLVSVA VVARTVAQLW NKPLVGVNHC IGHIEMGRLI 120
  121 TGATSPTVLY VSGGNTQVIA YSEHRYRIFG ETIDIAVGNC LDRFARVLKI SNDPSPGYNI 180
  181 EQMAKRGKKL VELPYTVKGM DVSFSGILSF IEDVAHRMLA TGECTPEDLC FSLQETVFAM 240
  241 LVEITERAMA HCGSQEALIV GGVGCNVRLQ EMMATMCQER GARLFATDER FCIDNGAMIA 300
  301 QAGWEMFRAG HRTPLSDSGV TQRYRTDEVE VTWRD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	85.09691
Match:	2ivnA
Description:	No description for 2ivnA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits