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View Structure Prediction Details

Protein: gi|114639482
Organism: Pan troglodytes
Length: 237 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114639482.

Description E-value Query
Range
Subject
Range
gi|54696674, gi|... - gi|61366711|gb|AAX42897.1| chloride channel nucleotide-sensitive 1A [synthetic construct], gi|608275...
1.0E-95 [1..237] [1..237]
gi|2197127 - gi|2197127|gb|AAC48778.1| swelling-induced chloride conductance regulatory protein pIcIn [Oryctolagu...
2.0E-95 [1..237] [1..236]
gi|8571386 - gi|8571386|gb|AAF76859.1| chloride ion current inducer protein I(Cln) [Homo sapiens]
4.0E-95 [1..237] [1..237]
ICLN_PONPY - Methylosome subunit pICln - Pongo pygmaeus (Orangutan)
ICLN_PONAB - Methylosome subunit pICln OS=Pongo abelii GN=CLNS1A PE=2 SV=1
3.0E-94 [1..237] [1..237]
gi|19263324, gi|... - gi|74141910|dbj|BAE41022.1| unnamed protein product [Mus musculus], gi|26327689|dbj|BAC27588.1| unna...
4.0E-94 [1..237] [6..241]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLKSFPPP GPAEGLLRQQ PDTEAVLNGK GLGTGTLYIA ESRLSWLDGS GLGFSLEYPT  60
   61 ISLHALSRDR SDCLGEHLYV MVNAKFEEES KEPVADEEEE DSDDDVEPIT EFRFVPSDKS 120
  121 ALEAMFTAMC ECQALHPDPE DEDSDDYDGE EYDVEAHEQG QGD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.522879
Match: 1zyiA
Description: Solution structure of ICLN, a multifunctional protein involved in regulatory mechanisms as different as cell volume regulation and rna splicing
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [164-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPTFYTYEEG LSHLTAEGQA TLERLEGMLS QSVSSQYNMA GVRTEDSIRD YEDGMEVDTT  60
   61 PTVAGQFEDA DVDH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle