YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|114623942
Organism: Pan troglodytes
Length: 283 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114623942.

Description E-value Query
Range
Subject
Range
gi|49456301 - gi|49456301|emb|CAG46471.1| MTAP [Homo sapiens]
4.0E-94 [1..283] [1..283]
MTAP_MOUSE - S-methyl-5'-thioadenosine phosphorylase OS=Mus musculus GN=Mtap PE=1 SV=1
1.0E-93 [1..283] [1..283]
gi|114623940 - gi|114623940|ref|XP_001152954.1| PREDICTED: similar to Chain A, Structure Of Human 5-Deoxy-5-Methylt...
1.0E-91 [1..283] [1..300]
gi|73971706 - gi|73971706|ref|XP_531959.2| PREDICTED: similar to S-methyl-5-thioadenosine phosphorylase (5-methylt...
6.0E-90 [12..283] [95..366]
MTAP_DANRE - S-methyl-5'-thioadenosine phosphorylase OS=Danio rerio GN=mtap PE=2 SV=2
3.0E-87 [5..283] [2..280]
gi|58332838, gi|... - gi|58332838|ref|NP_001011495.1| 5'-methylthioadenosine phosphorylase [Xenopus (Silurana) tropicalis]...
2.0E-84 [6..283] [3..280]

Back

Predicted Domain #1
Region A:
Residues: [1-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGTTTTAV KIGIIGGTGL DDPEILEGRT EKYVDTPFGK PSDALILGKI KNVDCVLLAR  60
   61 HGRQHTIMPS KVNYQANIWA LKEEGCTHVI VTTACGSLRE EIQPGDIVII DQFIDRTTMR 120
  121 PQSFYDGSHS CARGVCHIPM AEPFCPKTRE VLIETAKKLG LRCHSKGTMV TIEGPRFSSR 180
  181 AESFMFRTWG ADVINMTTVP EVVLAKEAGI CYASIAMATD YDCWKEHEEA VSVDRVLKTL 240
  241 KENANKAKSL LLTTIPQIGS TEWSETLHNL KNMAQFSVLL PRH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.0
Match: 1cb0A
Description: 5'-deoxy-5'-methylthioadenosine phosphorylase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
S-methyl-5-thioadenosine phosphorylase activity 3.89303327575747 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 3.66765825367784 bayes_pls_golite062009
purine-nucleoside phosphorylase activity 2.88401222133542 bayes_pls_golite062009
transferase activity 2.19158134892504 bayes_pls_golite062009
catalytic activity 2.18268586151113 bayes_pls_golite062009
transferase activity, transferring pentosyl groups 2.01261001022129 bayes_pls_golite062009
protein binding 0.0400212181978007 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle