| Protein: | gi|123982586, gi... |
| Organism: | synthetic construct |
| Length: | 353 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123982586, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-99 | [1..353] | [1..353] |
|
|
5.0E-99 | [1..353] | [1..353] |
|
|
1.0E-98 | [1..353] | [1..353] |
|
|
5.0E-98 | [1..353] | [1..353] |
|
|
1.0E-97 | [1..353] | [1..352] |
|
|
8.0E-97 | [1..353] | [1..354] |
|
|
3.0E-91 | [31..353] | [5..327] |
|
|
1.0E-84 | [1..347] | [1..339] |
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MAATKRKRRG GFAVQAKKPK RNEIDAEPPA KRHATAEEVE EEERDRIPGP VCKGKWKNKE 60
61 RILIFSSRGI NFRTRHLMQD LRMLMPHSKA DTKMDRKDKL FVINEVCEMK NCNKCIYFEA 120
121 KKKQDLYMWL SNSPHGPSAK FLVQNIHTLA ELKMTGNCLK
|
| Detection Method: |  |
| Confidence: | 11.522879 |
| Match: | 2cxhA |
| Description: | Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| aminoacyl-tRNA ligase activity | 3.87211694771248 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 3.87184649959884 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 3.87184649959884 | bayes_pls_golite062009 |
| ligase activity | 2.64230127203047 | bayes_pls_golite062009 |
| proline-tRNA ligase activity | 2.35871952544841 | bayes_pls_golite062009 |
| binding | 1.78917266819015 | bayes_pls_golite062009 |
| catalytic activity | 0.902495165806215 | bayes_pls_golite062009 |
| protein binding | 0.665778090365515 | bayes_pls_golite062009 |
|
Region A: Residues: [161-258] |
1 11 21 31 41 51
| | | | | |
1 GSRPLLSFDP AFDELPHYAL LKELLIQIFS TPRYHPKSQP FVDHVFTFTI LDNRIWFRNF 60
61 QIIEEDAALV EIGPRFVLNL IKIFQGSFGG PTLYENPH
|
| Detection Method: | |
| Confidence: | 1.52 |
| Match: | 2cxhA |
| Description: | Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [259-353] |
1 11 21 31 41 51
| | | | | |
1 YQSPNMHRRV IRSITAAKYR EKQQVKDVQK LRKKEPKTLL PHDPTADVFV TPAEEKPIEI 60
61 QWVKPEPKVD LKARKKRIYK RQRKMKQRMD SGKTK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.378 | 0.264 | ribosome biogenesis | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.515 | 0.158 | ribosome biogenesis | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.422 | 0.045 | ribosome biogenesis | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.474 | 0.017 | ribosome biogenesis | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.409 | N/A | N/A | d.14.1 | Ribosomal protein S5 domain 2-like |
