YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|125564680
Organism:	Oryza sativa Indica Group
Length:	72 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125564680.

Description	E-value	Query Range	Subject Range
gi\|70997695, gi\|... - gi\|70997695\|ref\|XP_753585.1\| stress response RCI peptide [Aspergillus fumigatus Af293], gi\|66851221\|... gi\|159126684 - gi\|159126684\|gb\|EDP51800.1\| stress response RCI peptide, putative [Aspergillus fumigatus A1163]	103.0	[0..5]	[70..2]
gi\|238506933, gi... - gi\|238506933\|ref\|XP_002384668.1\| stress response RCI peptide, putative [Aspergillus flavus NRRL3357]... gi\|83776210 - gi\|83776210\|dbj\|BAE66329.1\| unnamed protein product [Aspergillus oryzae] gi\|169786003 - gi\|169786003\|ref\|XP_001827462.1\| hypothetical protein [Aspergillus oryzae RIB40]	103.0	[0..5]	[70..2]
gi\|40745267, gi\|... - gi\|67523713\|ref\|XP_659916.1\| hypothetical protein AN2312.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	103.0	[0..5]	[70..2]
gi\|145009364, gi... - gi\|39949765\|ref\|XP_363224.1\| hypothetical protein MGG_08808 [Magnaporthe grisea 70-15], gb\|EAA51286....	102.0	[0..5]	[69..2]
gi\|46121245, gi\|... - gi\|46121245\|ref\|XP_385177.1\| hypothetical protein FG05001.1 [Gibberella zeae PH-1], gi\|42551259\|gb\|E...	101.0	[0..5]	[71..2]
gi\|114190175, gi... - gi\|115401292\|ref\|XP_001216234.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	97.0	[0..5]	[70..2]
gi\|49653203 - gi\|49653203\|emb\|CAG85547.1\| DEHA2B13618p [Debaryomyces hansenii] gi\|49653203, gi\|... - gi\|50416236\|ref\|XP_457538.1\| hypothetical protein DEHA0B13717g [Debaryomyces hansenii CBS767], gi\|49...	95.0	[0..1]	[70..1]
gi\|119192640, gi... - gi\|90305712\|gb\|EAS35343.1\| hypothetical protein CIMG_00697 [Coccidioides immitis RS], gi\|119192640\|r...	94.0	[0..5]	[71..2]
gi\|32411383, gi\|... - gi\|32411383\|ref\|XP_326172.1\| predicted protein [Neurospora crassa], gi\|28924188\|gb\|EAA33343.1\| conse... gi\|85108462 - gi\|85108462\|ref\|XP_962579.1\| hypothetical protein NCU06317 [Neurospora crassa OR74A]	94.0	[0..6]	[70..3]
gi\|111062769, gi... - gi\|169611226\|ref\|XP_001799031.1\| hypothetical protein SNOG_08721 [Phaeosphaeria nodorum SN15], gi\|11...	91.0	[0..5]	[71..2]

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Predicted Domain #1

Region A:
Residues: [1-72]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGRCCTFL EILLAIILPP LGVFLRFGCC SMEFCICLLL TILGYVPGII YAVYVLVALD  60
   61 SDQYQREYHT LA

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	22.173925
Match:	PF01679.8
Description:	No description for PF01679.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits