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View Structure Prediction Details

Protein: gi|124386319, gi...
Organism: Burkholderia mallei NCTC 10229
Length: 229 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|124386319, gi....

Description E-value Query
Range
Subject
Range
gi|254181465, gi... - gi|99911475|ref|ZP_01318335.1| hypothetical protein Bpse1_03002216 [Burkholderia pseudomallei 1655],...
gi|237811200, gi... - gi|237811200|ref|YP_002895651.1| mosc domain protein [Burkholderia pseudomallei MSHR346], gi|2375048...
289.0 [0..1] [229..1]

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Predicted Domain #1
Region A:
Residues: [1-229]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPTTAKLDA LLTGAIRPLA GTARTSAIDK QPVRERSWLA RTGFAGDEQA DRKHHGGPDK  60
   61 AVHHYAFDHY PQWIAEIGPR DVLARPGAFG ENLSTRGITE RDVCVGDVFT LGGATLQVSQ 120
  121 SRQPCWKLNA RFGLPKMSAR VQQSGRTGWY YRVLDEGWVE PDAELALRER PYPQWPLSNV 180
  181 LDVLYRRTLD VGALEALSRI DALPPSWRQL FERRLKAGAV EDWTKRLDG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.221849
Match: 1o65A
Description: Crystal structure of an hypothetical protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.442129199706088 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle