YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|254829196, gi...
Organism:	Listeria monocytogenes FSL N3-165
Length:	337 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|254829196, gi....

Description	E-value	Query Range	Subject Range
PLSX_LISIN - Phosphate acyltransferase OS=Listeria innocua GN=plsX PE=3 SV=1 PLSX_LISIN - Phosphate acyltransferase OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=plsX PE=3 SV=1	342.0	[0..1]	[337..1]
PLSX_BACCN - Phosphate acyltransferase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-...	327.0	[0..1]	[327..1]
PLSX_OCEIH - Phosphate acyltransferase OS=Oceanobacillus iheyensis GN=plsX PE=3 SV=1 PLSX_OCEIH - Phosphate acyltransferase OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HT...	327.0	[0..1]	[334..1]
gi\|30258500, gi\|... - gi\|30263856\|ref\|NP_846233.1\| putative glycerol-3-phosphate acyltransferase PlsX [Bacillus anthracis ... gi\|190563040, gi... - gi\|190566121\|ref\|ZP_03019040.1\| fatty acid/phospholipid synthesis protein PlsX [Bacillus anthracis T... gi\|65321181, gi\|... - gi\|65321181\|ref\|ZP_00394140.1\| COG0416: Fatty acid/phospholipid biosynthesis enzyme [Bacillus anthra... gi\|49180630, gi\|... - gi\|49186703\|ref\|YP_029955.1\| putative glycerol-3-phosphate acyltransferase PlsX [Bacillus anthracis ... gi\|47551935, gi\|... - gi\|47778230\|ref\|YP_022666.1\| putative glycerol-3-phosphate acyltransferase PlsX [Bacillus anthracis ... PLSX_BACAC - Phosphate acyltransferase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=plsX PE=3 SV=1 PLSX_BACAA - Phosphate acyltransferase OS=Bacillus anthracis (strain A0248) GN=plsX PE=3 SV=1 gi\|165873291, gi... - gi\|165873291\|ref\|ZP_02217899.1\| fatty acid/phospholipid synthesis protein PlsX [Bacillus anthracis s... gi\|254683439 - gi\|254683439\|ref\|ZP_05147299.1\| putative glycerol-3-phosphate acyltransferase PlsX [Bacillus anthrac... gi\|167636666, gi... - gi\|167636666\|ref\|ZP_02394956.1\| fatty acid/phospholipid synthesis protein PlsX [Bacillus anthracis s... gi\|254721384 - gi\|254721384\|ref\|ZP_05183173.1\| putative glycerol-3-phosphate acyltransferase PlsX [Bacillus anthrac... gi\|167642021, gi... - gi\|167642021\|ref\|ZP_02400252.1\| fatty acid/phospholipid synthesis protein PlsX [Bacillus anthracis s... gi\|254735891 - gi\|254735891\|ref\|ZP_05193597.1\| putative glycerol-3-phosphate acyltransferase PlsX [Bacillus anthrac... gi\|170689652, gi... - gi\|170689652\|ref\|ZP_02880833.1\| fatty acid/phospholipid synthesis protein PlsX [Bacillus anthracis s... gi\|254739524 - gi\|254739524\|ref\|ZP_05197221.1\| putative glycerol-3-phosphate acyltransferase PlsX [Bacillus anthrac... PLSX_BACAN - Phosphate acyltransferase OS=Bacillus anthracis GN=plsX PE=3 SV=1 gi\|170125740, gi... - gi\|170709345\|ref\|ZP_02899760.1\| fatty acid/phospholipid synthesis protein PlsX [Bacillus anthracis s... gi\|254751168 - gi\|254751168\|ref\|ZP_05203207.1\| putative glycerol-3-phosphate acyltransferase PlsX [Bacillus anthrac... gi\|177655962, gi... - gi\|177655962\|ref\|ZP_02937114.1\| fatty acid/phospholipid synthesis protein PlsX [Bacillus anthracis s... gi\|254756716 - gi\|254756716\|ref\|ZP_05208745.1\| putative glycerol-3-phosphate acyltransferase PlsX [Bacillus anthrac...	326.0	[0..1]	[327..1]
PLSX_BACCR - Phosphate acyltransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / N...	326.0	[0..1]	[327..1]
PLSX_BACAH - Phosphate acyltransferase OS=Bacillus thuringiensis (strain Al Hakam) GN=plsX PE=3 SV=1 PLSX_BACC3 - Phosphate acyltransferase OS=Bacillus cereus (strain 03BB102) GN=plsX PE=3 SV=1 PLSX_BACC7 - Phosphate acyltransferase OS=Bacillus cereus (strain AH187) GN=plsX PE=3 SV=1 gi\|196021757, gi... - gi\|196047449\|ref\|ZP_03114661.1\| fatty acid/phospholipid synthesis protein PlsX [Bacillus cereus 03BB... PLSX_BACC1 - Phosphate acyltransferase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=plsX PE=3 SV=1 gi\|196035828, gi... - gi\|196035828\|ref\|ZP_03103230.1\| fatty acid/phospholipid synthesis protein PlsX [Bacillus cereus W], ...	326.0	[0..1]	[327..1]
PLSX_BACCZ - Phosphate acyltransferase OS=Bacillus cereus (strain ZK / E33L) GN=plsX PE=3 SV=1 PLSX_BACHK - Phosphate acyltransferase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=plsX PE=3 SV=... PLSX_BACHK - Phosphate acyltransferase OS=Bacillus thuringiensis subsp. konkukian GN=plsX PE=3 SV=1 PLSX_BACC0 - Phosphate acyltransferase OS=Bacillus cereus (strain AH820) GN=plsX PE=3 SV=1 gi\|196042321, gi... - gi\|196042321\|ref\|ZP_03109597.1\| fatty acid/phospholipid synthesis protein PlsX [Bacillus cereus NVH0...	326.0	[0..1]	[327..1]
PLSX_NITMU - Phosphate acyltransferase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=plsX PE=3...	325.0	[0..1]	[336..3]
PLSX_DECAR - Phosphate acyltransferase OS=Dechloromonas aromatica (strain RCB) GN=plsX PE=3 SV=1	324.0	[0..2]	[334..4]
PLSX_BACWK - Phosphate acyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=plsX PE=3 SV=1	323.0	[0..1]	[327..1]

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Predicted Domain #1

Region A:
Residues: [1-337]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIAVDAMGG DHAPKEIVLG VMKAVAQYKD VEILLFGDET KINEYLTDKT RVKIIHTDEK  60
   61 IESDDEPVRA VKRKKKASMV LAAQAVKDGE ADACISAGNT GALMSTGLFV IGRIKGIDRP 120
  121 ALAPTLPTVT GKGFVMLDLG ANAEAKPEHL LQFGLMGSVY AEKVRKIDRP RVALLNIGTE 180
  181 ETKGNDLTKK SFELMKNQDA YEFIGNIEAR DLLMDVADVV VTDGFTGNMV LKSIEGTGAA 240
  241 FLSMLKMSLL NGFKNKVAAS FLKKDLMALK AKMDYSEYGG ACLFGVQAPV VKAHGSSNAN 300
  301 GIFTTIRQVR EMVEKQVVET IKAEVDKVKV GGTESND

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	81.39794
Match:	1u7nA
Description:	Crystal Structure of the fatty acid/phospholipid synthesis protein PlsX from Enterococcus faecalis V583
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	3.08295953338337	bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	2.07946164734141	bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors	1.99186466361671	bayes_pls_golite062009
oxidoreductase activity	0.784264951435624	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: