YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|153186161, gi...
Organism:	Listeria monocytogenes J0161
Length:	128 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|153186161, gi....

Description	E-value	Query Range	Subject Range
gi\|118652866, gi... - gi\|170733460\|ref\|YP_001765407.1\| cell division protein FtsB [Burkholderia cenocepacia MC0-3], gi\|169... gi\|116648216, gi... - gi\|67666377\|ref\|ZP_00463626.1\| Septum formation initiator [Burkholderia cenocepacia HI2424], gi\|6710... gi\|107028714, gi... - gi\|67657012\|ref\|ZP_00454392.1\| Septum formation initiator [Burkholderia cenocepacia AU 1054], gi\|670...	112.0	[0..34]	[125..1]
gi\|83623652, gi\|... - gi\|83623652\|ref\|ZP_00933917.1\| COG2919: Septum formation initiator [Burkholderia mallei JHU], gi\|254... gi\|134250655, gi... - gi\|134277005\|ref\|ZP_01763720.1\| septum formation initiator domain protein [Burkholderia pseudomallei... gi\|83679487, gi\|... - gi\|83679487\|ref\|ZP_00941200.1\| COG2919: Septum formation initiator [Burkholderia pseudomallei 406e],... gi\|82536727, gi\|... - gi\|82536727\|ref\|ZP_00895730.1\| hypothetical protein Bpse110_02001946 [Burkholderia pseudomallei 1106... gi\|254200263, gi... - gi\|83618746\|ref\|ZP_00929198.1\| COG2919: Septum formation initiator [Burkholderia mallei FMH], gi\|254... gi\|126451167, gi... - gi\|67646760\|ref\|ZP_00445013.1\| COG2919: Septum formation initiator [Burkholderia mallei NCTC 10247],... gi\|99909869, gi\|... - gi\|99909869\|ref\|ZP_01316967.1\| hypothetical protein Bpse1_03003656 [Burkholderia pseudomallei 1655],... gi\|67634802, gi\|... - gi\|67634802\|ref\|ZP_00433768.1\| COG2919: Septum formation initiator [Burkholderia mallei 10399], gi\|1... gi\|67642980, gi\|... - gi\|67642980\|ref\|ZP_00441730.1\| septum formation initiator family protein [Burkholderia mallei GB8 ho... gi\|82531608, gi\|... - gi\|82531608\|ref\|ZP_00890825.1\| COG2919: Septum formation initiator [Burkholderia pseudomallei 1106a]... gi\|167739318 - gi\|167739318\|ref\|ZP_02412092.1\| cell divison protein FtsB [Burkholderia pseudomallei 14] gi\|225929020, gi... - gi\|226198920\|ref\|ZP_03794483.1\| septum formation initiator domain protein [Burkholderia pseudomallei... gi\|167816534 - gi\|167816534\|ref\|ZP_02448214.1\| cell divison protein FtsB [Burkholderia pseudomallei 91] gi\|243062454, gi... - gi\|243062454\|gb\|EES44640.1\| septum formation initiator family protein [Burkholderia mallei PRL-20], ... gi\|167720324 - gi\|167720324\|ref\|ZP_02403560.1\| cell divison protein FtsB [Burkholderia pseudomallei DM98] gi\|237502783, gi... - gi\|237812995\|ref\|YP_002897446.1\| cell divison protein FtsB [Burkholderia pseudomallei MSHR346], gi\|2... gi\|167895024 - gi\|167895024\|ref\|ZP_02482426.1\| cell divison protein FtsB [Burkholderia pseudomallei 7894] gi\|167903408 - gi\|167903408\|ref\|ZP_02490613.1\| cell divison protein FtsB [Burkholderia pseudomallei NCTC 13177] gi\|167824929 - gi\|167824929\|ref\|ZP_02456400.1\| cell divison protein FtsB [Burkholderia pseudomallei 9] gi\|167846445 - gi\|167846445\|ref\|ZP_02471953.1\| cell divison protein FtsB [Burkholderia pseudomallei B7210] gi\|52210293, gi\|... - gi\|53719879\|ref\|YP_108865.1\| cell division protein FtsB [Burkholderia pseudomallei K96243], gi\|52210... gi\|52427206, gi\|... - gi\|53723783\|ref\|YP_103308.1\| cell division protein FtsB [Burkholderia mallei ATCC 23344], gi\|5242720... gi\|84522301, gi\|... - gi\|84522301\|ref\|ZP_01009437.1\| COG2919: Septum formation initiator [Burkholderia mallei SAVP1], gi\|1... gi\|217420905, gi... - gi\|217420905\|ref\|ZP_03452410.1\| septum formation initiator domain protein [Burkholderia pseudomallei... gi\|254191420, gi... - gi\|67754307\|ref\|ZP_00493218.1\| COG2919: Septum formation initiator [Burkholderia pseudomallei Pasteu... gi\|124386271, gi... - gi\|124386271\|ref\|YP_001029067.1\| cell division protein FtsB [Burkholderia mallei NCTC 10229], gi\|124... gi\|254258692, gi... - gi\|90292424\|ref\|ZP_01212037.1\| hypothetical protein Bpse17_02002966 [Burkholderia pseudomallei 1710a... gi\|167911661 - gi\|167911661\|ref\|ZP_02498752.1\| cell divison protein FtsB [Burkholderia pseudomallei 112] gi\|126220329, gi... - gi\|67737196\|ref\|ZP_00487994.1\| COG2919: Septum formation initiator [Burkholderia pseudomallei 668], ... gi\|160698734, gi... - gi\|254177695\|ref\|ZP_04884350.1\| septum formation initiator family protein [Burkholderia mallei ATCC ... gi\|100265445, gi... - gi\|87316297\|ref\|ZP_01097315.1\| COG2919: Septum formation initiator [Burkholderia mallei 2002721280],... gi\|76579988, gi\|... - gi\|76810535\|ref\|YP_334096.1\| cell division protein FtsB [Burkholderia pseudomallei 1710b], gi\|765799... gi\|254195856, gi... - gi\|67762049\|ref\|ZP_00500753.1\| COG2919: Septum formation initiator [Burkholderia pseudomallei S13], ... gi\|85067257 - gi\|85067257\|ref\|ZP_01028110.1\| COG2919: Septum formation initiator [Burkholderia mallei 10229]	110.0	[0..34]	[125..1]
gi\|67549710, gi\|... - gi\|67549710\|ref\|ZP_00427561.1\| Septum formation initiator [Burkholderia vietnamiensis G4], gi\|675289...	109.0	[0..34]	[125..1]
gi\|78066881, gi\|... - gi\|78066881\|ref\|YP_369650.1\| cell division protein FtsB [Burkholderia sp. 383], gi\|77967626\|gb\|ABB09...	109.0	[0..34]	[125..1]
gi\|72609661, gi\|... - gi\|74017776\|ref\|ZP_00688399.1\| Septum formation initiator [Burkholderia ambifaria AMMD], gi\|72609661... gi\|170135779, gi... - gi\|170699287\|ref\|ZP_02890336.1\| Septum formation initiator [Burkholderia ambifaria IOP40-10], gi\|170...	107.0	[0..34]	[125..1]
gi\|16799326 - gi\|16799326\|ref\|NP_469594.1\| hypothetical protein lin0249 [Listeria innocua Clip11262] gi\|25337560, gi\|... - pir\|\|AB1464 B. subtilis DivIC protein homolog lin0249 [imported] - Listeria innocua (strain Clip1126...	107.0	[0..1]	[128..1]
gi\|23094436, gi\|... - gi\|25010085\|ref\|NP_734480.1\| hypothetical protein gbs0010 [Streptococcus agalactiae NEM316], gi\|2309... gi\|76563611, gi\|... - gi\|76788554\|ref\|YP_328737.1\| hypothetical protein SAK_0010 [Streptococcus agalactiae A909], gi\|76563... gi\|77159479, gi\|... - gi\|77414469\|ref\|ZP_00790619.1\| putative cell division protein DivIC [Streptococcus agalactiae 515], ... gi\|77162657, gi\|... - gi\|77411321\|ref\|ZP_00787670.1\| cell division protein DivIC, putative [Streptococcus agalactiae CJB11... gi\|77173698, gi\|... - gi\|77407699\|ref\|ZP_00784454.1\| cell division protein DivIC, putative [Streptococcus agalactiae COH1]... gi\|77175762, gi\|... - gi\|77405618\|ref\|ZP_00782707.1\| cell division protein DivIC, putative [Streptococcus agalactiae H36B]... gi\|22536196, gi\|... - gi\|22536196\|ref\|NP_687047.1\| hypothetical protein SAG0011 [Streptococcus agalactiae 2603V/R], gi\|225... gi\|76586658, gi\|... - gi\|76797978\|ref\|ZP_00780237.1\| conserved hypothetical protein [Streptococcus agalactiae 18RS21], gi\|...	107.0	[0..4]	[121..2]
gi\|47093159, gi\|... - gi\|47093159\|ref\|ZP_00230934.1\| cell division protein DivIC, putative [Listeria monocytogenes str. 4b...	107.0	[0..1]	[128..1]
gi\|83718705, gi\|... - gi\|83718705\|ref\|YP_442425.1\| cell division protein FtsB [Burkholderia thailandensis E264], gi\|836525... gi\|167619431 - gi\|167619431\|ref\|ZP_02388062.1\| cell divison protein FtsB [Burkholderia thailandensis Bt4] gi\|167581354 - gi\|167581354\|ref\|ZP_02374228.1\| cell divison protein FtsB [Burkholderia thailandensis TXDOH]	105.0	[0..34]	[125..1]
gi\|197739757, gi... - gi\|254363940\|ref\|ZP_04979986.1\| conserved membrane protein [Mycobacterium tuberculosis str. Haarlem]... gi\|167968117, gi... - gi\|167968117\|ref\|ZP_02550394.1\| hypothetical protein MtubH3_08810 [Mycobacterium tuberculosis H37Ra]... gi\|215402839 - gi\|215402839\|ref\|ZP_03415020.1\| hypothetical protein Mtub0_03937 [Mycobacterium tuberculosis 02_1987... gi\|215410627 - gi\|215410627\|ref\|ZP_03419435.1\| hypothetical protein Mtub9_04726 [Mycobacterium tuberculosis 94_M424... gi\|215426305 - gi\|215426305\|ref\|ZP_03424224.1\| hypothetical protein MtubT9_07950 [Mycobacterium tuberculosis T92] gi\|215429885 - gi\|215429885\|ref\|ZP_03427804.1\| hypothetical protein MtubE_04199 [Mycobacterium tuberculosis EAS054] gi\|215445173 - gi\|215445173\|ref\|ZP_03431925.1\| hypothetical protein MtubT_04241 [Mycobacterium tuberculosis T85] gi\|218752695 - gi\|218752695\|ref\|ZP_03531491.1\| hypothetical protein MtubG1_04280 [Mycobacterium tuberculosis GM 150... gi\|224989425, gi... - gi\|224989425\|ref\|YP_002644112.1\| hypothetical protein JTY_1053 [Mycobacterium bovis BCG str. Tokyo 1... gi\|1870004, gi\|1... - gi\|1870004\|emb\|CAB06855.1\| POSSIBLE CONSERVED MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv], g... gi\|124600374, gi... - gi\|81255031\|ref\|ZP_00879523.1\| COG2919: Septum formation initiator [Mycobacterium tuberculosis C], g... gi\|121636953, gi... - gi\|121636953\|ref\|YP_977176.1\| hypothetical protein BCG_1081 [Mycobacterium bovis BCG str. Pasteur 11... gi\|31792215, gi\|... - gi\|31792215\|ref\|NP_854708.1\| hypothetical protein Mb1052 [Mycobacterium bovis AF2122/97], gi\|3161780... gi\|15840452, gi\|... - gi\|15840452\|ref\|NP_335489.1\| hypothetical protein MT1052 [Mycobacterium tuberculosis CDC1551], gi\|13... gi\|7476602 - pir\|\|C70623 hypothetical protein Rv1024 - Mycobacterium tuberculosis (strain H37RV) gi\|123214577, gi... - gi\|76785280\|ref\|ZP_00772452.1\| COG2919: Septum formation initiator [Mycobacterium tuberculosis F11],... gi\|255095787 - gi\|255095787\|ref\|ZP_05325265.1\| hypothetical protein MtubK_05879 [Mycobacterium tuberculosis KZN 605... gi\|254814811 - gi\|254814811\|ref\|ZP_05219812.1\| hypothetical protein MtubKZN_03254 [Mycobacterium tuberculosis KZN 4... gi\|254550008 - gi\|254550008\|ref\|ZP_05140455.1\| hypothetical protein Mtube_06033 [Mycobacterium tuberculosis '98-R60... gi\|253799946, gi... - gi\|253799946\|ref\|YP_003032947.1\| hypothetical protein TBMG_02963 [Mycobacterium tuberculosis KZN 143...	105.0	[0..2]	[119..47]

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Predicted Domain #1

Region A:
Residues: [1-128]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKAKSKVAR IENRYIKDTA TMKKTRSRRR IALFRRLAFM AIIFAVVGGL LTITYTKQVL  60
   61 TLKEKKEKQV QVDKKMVAMK DEQDSLNEQI KKLHNDDYIA KLARSEYYLS KDGEIIFNIP 120
  121 EENSKQKE

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	22.744727
Match:	PF04977.6
Description:	No description for PF04977.6 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits