YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|133729714, gi...
Organism:	Listeria monocytogenes FSL N3-165
Length:	270 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|133729714, gi....

Description	E-value	Query Range	Subject Range
gi\|16801206 - gi\|16801206\|ref\|NP_471474.1\| hypothetical protein lin2140 [Listeria innocua Clip11262] gi\|25355693, gi\|... - pir\|\|AB1700 cell-division initiation protein divIB homolog divIB [imported] - Listeria innocua (stra...	223.0	[0..1]	[252..1]
gi\|133734834, gi... - gi\|254933462\|ref\|ZP_05266821.1\| cell division protein FtsQ [Listeria monocytogenes HPB2262], gi\|1532... gi\|255522105 - gi\|255522105\|ref\|ZP_05389342.1\| cell division protein FtsQ [Listeria monocytogenes FSL J1-175] gi\|254826210 - gi\|254826210\|ref\|ZP_05231211.1\| cell division protein FtsQ [Listeria monocytogenes FSL J1-194] gi\|46908270, gi\|... - gi\|46908270\|ref\|YP_014659.1\| cell division protein FtsQ [Listeria monocytogenes str. 4b F2365], gi\|4...	220.0	[0..1]	[270..1]
gi\|22777154, gi\|... - gi\|23098926\|ref\|NP_692392.1\| cell-division initiation protein [Oceanobacillus iheyensis HTE831], gi\|...	215.0	[0..3]	[270..2]
gi\|2222675 - gi\|2222675\|emb\|CAA74236.1\| ftsQ [Enterococcus hirae]	204.0	[0..9]	[269..24]
gi\|409708 - gi\|409708\|gb\|AAA72409.1\| divIB [Bacillus subtilis] gi\|409708\|gb\|AAA... - divIB	200.0	[0..3]	[260..6]
DIVB_BACSU, DIVI... - Cell division protein DivIB OS=Bacillus subtilis GN=divIB PE=1 SV=1, (P16655) Division initiation pr... DIVIB_BACSU - Cell division protein DivIB OS=Bacillus subtilis (strain 168) GN=divIB PE=1 SV=1 gi\|221313723 - gi\|221313723\|ref\|ZP_03595528.1\| cell-division initiation protein [Bacillus subtilis subsp. subtilis ... gi\|221318647 - gi\|221318647\|ref\|ZP_03599941.1\| cell-division initiation protein [Bacillus subtilis subsp. subtilis ... gi\|221322920 - gi\|221322920\|ref\|ZP_03604214.1\| cell-division initiation protein [Bacillus subtilis subsp. subtilis ...	200.0	[0..3]	[260..6]
gi\|69244712, gi\|... - gi\|69244712\|ref\|ZP_00602976.1\| Cell division protein FtsQ [Enterococcus faecium DO], gi\|68196303\|gb\|...	198.0	[0..9]	[263..93]
DIVIB_ENTFA - Cell division protein DivIB OS=Enterococcus faecalis (strain ATCC 700802 / V583) GN=divIB PE=3 SV=1 gi\|227555105, gi... - gi\|227555105\|ref\|ZP_03985152.1\| cell division protein FtsQ [Enterococcus faecalis HH22], gi\|22717577... DIVIB_ENTFA - Cell division protein DivIB OS=Enterococcus faecalis GN=divIB PE=3 SV=1	198.0	[0..10]	[267..85]
gi\|2149907 - gi\|2149907\|gb\|AAC45637.1\| cell division protein [Enterococcus faecalis]	198.0	[0..10]	[267..85]
gi\|52080126, gi\|... - gi\|52785500\|ref\|YP_091329.1\| DivIB [Bacillus licheniformis ATCC 14580], gi\|52348002\|gb\|AAU40636.1\| D...	197.0	[0..3]	[258..6]

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Predicted Domain #1

Region A:
Residues: [1-270]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAENKRVISI ENRIPELKKY RKKKLVRHLA ILIGIFVILI AITLYFLSPL SKLDKIAVSG  60
   61 NKQLTENEVR KESGLEIGEF VIGISNGKTE DALKKNTLIK DATVSKEGLN DVQINITEFK 120
  121 TIGYQQQDGK YYDVLESGIM LTDQPRQFPI GNDLLFQNFK NGKTLEKMVD QINKLPKDVV 180
  181 SSISEVIYSP TKSDKNHIKL YMNDGNQVSA DISTFAEKMQ HYPAIVAQLA KGQKGVIDIE 240
  241 VGSYFQSYYQ QNAEKKATEE AAKEKKETNE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	26.69897
Match:	2qczA
Description:	No description for 2qczA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits